Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 CYCTP-201ENST00000504253 315 ntBASIC4.39□□□□□ -1.71
NID1P14543 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.39□□□□□ -1.71
NID1P14543 RNU4-57P-201ENST00000515980 135 ntBASIC4.39□□□□□ -1.71
NID1P14543 RNU1-6P-201ENST00000516290 144 ntBASIC4.39□□□□□ -1.71
NID1P14543 SCARNA15.2-201ENST00000516409 127 ntBASIC4.39□□□□□ -1.71
NID1P14543 RNU6-1198P-201ENST00000516904 67 ntBASIC4.39□□□□□ -1.71
NID1P14543 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.39□□□□□ -1.71
NID1P14543 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NID1P14543 MIR5699-201ENST00000578903 90 ntBASIC4.39□□□□□ -1.71
NID1P14543 MIR4270-201ENST00000581799 70 ntBASIC4.39□□□□□ -1.71
NID1P14543 AC090616.3-201ENST00000582184 217 ntBASIC4.39□□□□□ -1.71
NID1P14543 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.39□□□□□ -1.71
NID1P14543 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.39□□□□□ -1.71
NID1P14543 AC048347.1-201ENST00000624621 427 ntBASIC4.39□□□□□ -1.71
NID1P14543 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NID1P14543 ZFRP1-201ENST00000457579 2970 ntBASIC4.39□□□□□ -1.71
NID1P14543 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NID1P14543 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NID1P14543 AC022893.2-201ENST00000564832 3296 ntBASIC4.39□□□□□ -1.71
NID1P14543 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NID1P14543 AC015813.6-201ENST00000624409 5808 ntBASIC4.39□□□□□ -1.71
NID1P14543 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NID1P14543 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.38□□□□□ -1.71
NID1P14543 ASNSP1-201ENST00000518311 1939 ntBASIC4.38□□□□□ -1.71
NID1P14543 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.38□□□□□ -1.71
NID1P14543 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
NID1P14543 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NID1P14543 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.38□□□□□ -1.71
NID1P14543 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.38□□□□□ -1.71
NID1P14543 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NID1P14543 DEFB108F-201ENST00000344638 222 ntBASIC4.38□□□□□ -1.71
NID1P14543 RNU6-1255P-201ENST00000363434 112 ntBASIC4.38□□□□□ -1.71
NID1P14543 RNU6-898P-201ENST00000365627 104 ntBASIC4.38□□□□□ -1.71
NID1P14543 RNU6-142P-201ENST00000384019 107 ntBASIC4.38□□□□□ -1.71
NID1P14543 U8.10-201ENST00000384260 133 ntBASIC4.38□□□□□ -1.71
NID1P14543 RNU6-1248P-201ENST00000391096 64 ntBASIC4.38□□□□□ -1.71
NID1P14543 EIF4A1P3-201ENST00000411521 244 ntBASIC4.38□□□□□ -1.71
NID1P14543 AL590139.1-201ENST00000416267 400 ntBASIC4.38□□□□□ -1.71
NID1P14543 TDGF1P1-201ENST00000445734 527 ntBASIC4.38□□□□□ -1.71
NID1P14543 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.38□□□□□ -1.71
NID1P14543 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.38□□□□□ -1.71
NID1P14543 RNU6-58P-201ENST00000517143 103 ntBASIC4.38□□□□□ -1.71
NID1P14543 DEFB131C-201ENST00000528817 165 ntBASIC4.38□□□□□ -1.71
NID1P14543 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.38□□□□□ -1.71
NID1P14543 AC133555.2-201ENST00000550213 292 ntBASIC4.38□□□□□ -1.71
NID1P14543 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.38□□□□□ -1.71
NID1P14543 MIR4431-201ENST00000579990 94 ntBASIC4.38□□□□□ -1.71
NID1P14543 DNAJC19P2-201ENST00000593340 302 ntBASIC4.38□□□□□ -1.71
NID1P14543 AC099669.2-201ENST00000616549 437 ntBASIC4.38□□□□□ -1.71
NID1P14543 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NID1P14543 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NID1P14543 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.38□□□□□ -1.71
NID1P14543 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NID1P14543 AC026951.1-201ENST00000559530 2459 ntBASIC4.38□□□□□ -1.71
NID1P14543 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.38□□□□□ -1.71
NID1P14543 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.38□□□□□ -1.71
NID1P14543 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
NID1P14543 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NID1P14543 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NID1P14543 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NID1P14543 AL590762.2-201ENST00000395798 571 ntBASIC4.37□□□□□ -1.71
NID1P14543 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NID1P14543 MTHFD2P2-201ENST00000407725 247 ntBASIC4.37□□□□□ -1.71
NID1P14543 Y_RNA.595-201ENST00000410403 105 ntBASIC4.37□□□□□ -1.71
NID1P14543 RNA5SP113-201ENST00000410486 84 ntBASIC4.37□□□□□ -1.71
NID1P14543 RN7SKP100-201ENST00000411258 284 ntBASIC4.37□□□□□ -1.71
NID1P14543 AC098614.2-201ENST00000426040 255 ntBASIC4.37□□□□□ -1.71
NID1P14543 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.37□□□□□ -1.71
NID1P14543 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NID1P14543 PTMAP3-201ENST00000447474 330 ntBASIC4.37□□□□□ -1.71
NID1P14543 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.37□□□□□ -1.71
NID1P14543 AC006026.2-201ENST00000457376 180 ntBASIC4.37□□□□□ -1.71
NID1P14543 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.37□□□□□ -1.71
NID1P14543 RN7SL385P-201ENST00000468873 276 ntBASIC4.37□□□□□ -1.71
NID1P14543 SCARNA22-201ENST00000503991 125 ntBASIC4.37□□□□□ -1.71
NID1P14543 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NID1P14543 AC107027.2-201ENST00000512197 115 ntBASIC4.37□□□□□ -1.71
NID1P14543 RNU6-1256P-201ENST00000516539 103 ntBASIC4.37□□□□□ -1.71
NID1P14543 AC016256.1-201ENST00000547971 354 ntBASIC4.37□□□□□ -1.71
NID1P14543 AL391358.1-201ENST00000605342 190 ntBASIC4.37□□□□□ -1.71
NID1P14543 FAM27B-201ENST00000610601 213 ntBASIC4.37□□□□□ -1.71
NID1P14543 MIR4679-1-201ENST00000637619 75 ntBASIC4.37□□□□□ -1.71
NID1P14543 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NID1P14543 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NID1P14543 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NID1P14543 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NID1P14543 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NID1P14543 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
NID1P14543 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.37□□□□□ -1.71
NID1P14543 AL136164.3-201ENST00000624429 3978 ntBASIC4.37□□□□□ -1.71
NID1P14543 MFSD8-216ENST00000641147 4009 ntBASIC4.37□□□□□ -1.71
NID1P14543 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NID1P14543 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.36□□□□□ -1.71
NID1P14543 SAMMSON-226ENST00000642089 1582 ntBASIC4.36□□□□□ -1.71
NID1P14543 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NID1P14543 AC126323.6-202ENST00000568092 3511 ntBASIC4.36□□□□□ -1.71
NID1P14543 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.36□□□□□ -1.71
NID1P14543 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NID1P14543 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NID1P14543 RNU5B-2P-201ENST00000363036 113 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms