Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SNORA36A-201ENST00000384221 132 ntBASIC5.37□□□□□ -1.55
RNF40O75150 MIR518D-201ENST00000385014 87 ntBASIC5.37□□□□□ -1.55
RNF40O75150 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF40O75150 CKS1BP5-201ENST00000434172 273 ntBASIC5.37□□□□□ -1.55
RNF40O75150 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF40O75150 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF40O75150 MTCO1P44-201ENST00000441935 243 ntBASIC5.37□□□□□ -1.55
RNF40O75150 AC097484.1-201ENST00000471148 389 ntBASIC5.37□□□□□ -1.55
RNF40O75150 AC006463.2-201ENST00000473326 348 ntBASIC5.37□□□□□ -1.55
RNF40O75150 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.37□□□□□ -1.55
RNF40O75150 RNA5SP54-201ENST00000516951 92 ntBASIC5.37□□□□□ -1.55
RNF40O75150 RNU2-12P-201ENST00000517216 168 ntBASIC5.37□□□□□ -1.55
RNF40O75150 AC136628.3-201ENST00000521868 290 ntBASIC5.37□□□□□ -1.55
RNF40O75150 NACAP3-201ENST00000552100 481 ntBASIC5.37□□□□□ -1.55
RNF40O75150 AC090132.2-201ENST00000615881 347 ntBASIC5.37□□□□□ -1.55
RNF40O75150 AC012640.5-201ENST00000623897 319 ntBASIC5.37□□□□□ -1.55
RNF40O75150 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF40O75150 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF40O75150 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RNF40O75150 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RNF40O75150 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
RNF40O75150 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF40O75150 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF40O75150 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF40O75150 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF40O75150 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF40O75150 AC073073.2-201ENST00000609827 2578 ntBASIC5.36□□□□□ -1.55
RNF40O75150 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.36□□□□□ -1.55
RNF40O75150 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF40O75150 RNU6-915P-201ENST00000364943 103 ntBASIC5.36□□□□□ -1.55
RNF40O75150 CYP4F29P-201ENST00000420685 446 ntBASIC5.36□□□□□ -1.55
RNF40O75150 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF40O75150 AC007969.2-201ENST00000441891 191 ntBASIC5.36□□□□□ -1.55
RNF40O75150 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF40O75150 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF40O75150 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC5.36□□□□□ -1.55
RNF40O75150 AC073073.1-201ENST00000493920 463 ntBASIC5.36□□□□□ -1.55
RNF40O75150 RNA5SP249-201ENST00000516127 99 ntBASIC5.36□□□□□ -1.55
RNF40O75150 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF40O75150 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.36□□□□□ -1.55
RNF40O75150 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF40O75150 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.36□□□□□ -1.55
RNF40O75150 AC087385.3-201ENST00000620477 187 ntBASIC5.36□□□□□ -1.55
RNF40O75150 snoZ196.1-201ENST00000625269 89 ntBASIC5.36□□□□□ -1.55
RNF40O75150 U6.95-201ENST00000636931 70 ntBASIC5.36□□□□□ -1.55
RNF40O75150 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF40O75150 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF40O75150 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF40O75150 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF40O75150 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RNF40O75150 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF40O75150 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF40O75150 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF40O75150 AC010733.2-201ENST00000589496 5702 ntBASIC5.36□□□□□ -1.55
RNF40O75150 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF40O75150 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
RNF40O75150 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF40O75150 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF40O75150 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
RNF40O75150 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF40O75150 RNU5F-3P-201ENST00000363767 117 ntBASIC5.35□□□□□ -1.55
RNF40O75150 Y_RNA.280-201ENST00000364765 112 ntBASIC5.35□□□□□ -1.55
RNF40O75150 RNA5SP455-201ENST00000365190 119 ntBASIC5.35□□□□□ -1.55
RNF40O75150 Y_RNA.498-201ENST00000384460 102 ntBASIC5.35□□□□□ -1.55
RNF40O75150 RNU2-68P-201ENST00000410878 191 ntBASIC5.35□□□□□ -1.55
RNF40O75150 COX6B1P1-201ENST00000415962 213 ntBASIC5.35□□□□□ -1.55
RNF40O75150 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF40O75150 HSPE1P13-201ENST00000451143 297 ntBASIC5.35□□□□□ -1.55
RNF40O75150 AC009220.1-201ENST00000451614 275 ntBASIC5.35□□□□□ -1.55
RNF40O75150 SNORD116-26-201ENST00000516006 96 ntBASIC5.35□□□□□ -1.55
RNF40O75150 RNU6-1007P-201ENST00000516586 107 ntBASIC5.35□□□□□ -1.55
RNF40O75150 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.35□□□□□ -1.55
RNF40O75150 uc_338.18-201ENST00000615451 175 ntBASIC5.35□□□□□ -1.55
RNF40O75150 MIR6810-201ENST00000622701 70 ntBASIC5.35□□□□□ -1.55
RNF40O75150 AP000542.2-201ENST00000623199 6179 ntBASIC5.35□□□□□ -1.55
RNF40O75150 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF40O75150 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
RNF40O75150 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF40O75150 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF40O75150 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF40O75150 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF40O75150 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF40O75150 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
RNF40O75150 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF40O75150 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.34□□□□□ -1.55
RNF40O75150 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RNF40O75150 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.34□□□□□ -1.55
RNF40O75150 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNF40O75150 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF40O75150 U3.3-201ENST00000362986 216 ntBASIC5.34□□□□□ -1.55
RNF40O75150 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF40O75150 RNU6-1310P-201ENST00000384153 107 ntBASIC5.34□□□□□ -1.55
RNF40O75150 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RNF40O75150 AL355497.1-201ENST00000406262 551 ntBASIC5.34□□□□□ -1.55
RNF40O75150 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF40O75150 RN7SKP284-201ENST00000411002 343 ntBASIC5.34□□□□□ -1.55
RNF40O75150 FAR2P2-201ENST00000413041 594 ntBASIC5.34□□□□□ -1.55
RNF40O75150 AC096649.2-201ENST00000416186 393 ntBASIC5.34□□□□□ -1.55
RNF40O75150 BPY2DP-201ENST00000422208 265 ntBASIC5.34□□□□□ -1.55
RNF40O75150 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms