Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 MIR544A-201ENST00000384855 91 ntBASIC3.8□□□□□ -1.8
U3KQE9 MIR223-201ENST00000385204 110 ntBASIC3.8□□□□□ -1.8
U3KQE9 RNU6-1197P-201ENST00000391183 107 ntBASIC3.8□□□□□ -1.8
U3KQE9 RPL30P13-201ENST00000418873 348 ntBASIC3.8□□□□□ -1.8
U3KQE9 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.8□□□□□ -1.8
U3KQE9 FTH1P6-201ENST00000430768 320 ntBASIC3.8□□□□□ -1.8
U3KQE9 AC244670.1-201ENST00000436879 112 ntBASIC3.8□□□□□ -1.8
U3KQE9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.8□□□□□ -1.8
U3KQE9 RN7SL222P-201ENST00000476452 299 ntBASIC3.8□□□□□ -1.8
U3KQE9 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.8□□□□□ -1.8
U3KQE9 RN7SL30P-201ENST00000488416 306 ntBASIC3.8□□□□□ -1.8
U3KQE9 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
U3KQE9 COX6B1P5-201ENST00000509843 249 ntBASIC3.8□□□□□ -1.8
U3KQE9 AC027308.1-201ENST00000517993 110 ntBASIC3.8□□□□□ -1.8
U3KQE9 AC100767.1-201ENST00000528178 123 ntBASIC3.8□□□□□ -1.8
U3KQE9 BNIP3P1-201ENST00000547295 580 ntBASIC3.8□□□□□ -1.8
U3KQE9 AC007225.2-201ENST00000562529 256 ntBASIC3.8□□□□□ -1.8
U3KQE9 MIR4431-201ENST00000579990 94 ntBASIC3.8□□□□□ -1.8
U3KQE9 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC3.8□□□□□ -1.8
U3KQE9 AL359881.1-201ENST00000602916 267 ntBASIC3.8□□□□□ -1.8
U3KQE9 AC012468.1-201ENST00000604888 430 ntBASIC3.8□□□□□ -1.8
U3KQE9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
U3KQE9 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
U3KQE9 AL672167.1-204ENST00000641875 3017 ntBASIC3.8□□□□□ -1.8
U3KQE9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
U3KQE9 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.8□□□□□ -1.8
U3KQE9 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC3.8□□□□□ -1.8
U3KQE9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
U3KQE9 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
U3KQE9 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
U3KQE9 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
U3KQE9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.79□□□□□ -1.8
U3KQE9 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
U3KQE9 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
U3KQE9 SNURFL-201ENST00000309296 343 ntBASIC3.79□□□□□ -1.8
U3KQE9 RNU1-62P-201ENST00000362599 164 ntBASIC3.79□□□□□ -1.8
U3KQE9 Y_RNA.101-201ENST00000363154 102 ntBASIC3.79□□□□□ -1.8
U3KQE9 SNORA70.10-201ENST00000384515 134 ntBASIC3.79□□□□□ -1.8
U3KQE9 RNA5SP390-201ENST00000410191 113 ntBASIC3.79□□□□□ -1.8
U3KQE9 RNU6-1199P-201ENST00000411249 104 ntBASIC3.79□□□□□ -1.8
U3KQE9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.79□□□□□ -1.8
U3KQE9 AC079355.1-201ENST00000421770 223 ntBASIC3.79□□□□□ -1.8
U3KQE9 RPL34P20-201ENST00000442771 351 ntBASIC3.79□□□□□ -1.8
U3KQE9 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.79□□□□□ -1.8
U3KQE9 RPS20P10-201ENST00000451209 253 ntBASIC3.79□□□□□ -1.8
U3KQE9 RPL30P12-201ENST00000474666 353 ntBASIC3.79□□□□□ -1.8
U3KQE9 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.79□□□□□ -1.8
U3KQE9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.79□□□□□ -1.8
U3KQE9 RN7SL244P-201ENST00000493405 297 ntBASIC3.79□□□□□ -1.8
U3KQE9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
U3KQE9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.79□□□□□ -1.8
U3KQE9 AC107027.2-201ENST00000512197 115 ntBASIC3.79□□□□□ -1.8
U3KQE9 Y_RNA.797-201ENST00000515977 94 ntBASIC3.79□□□□□ -1.8
U3KQE9 RNA5SP249-201ENST00000516127 99 ntBASIC3.79□□□□□ -1.8
U3KQE9 RNA5SP43-201ENST00000516559 110 ntBASIC3.79□□□□□ -1.8
U3KQE9 Y_RNA.719-201ENST00000517156 106 ntBASIC3.79□□□□□ -1.8
U3KQE9 AC115990.1-201ENST00000526957 301 ntBASIC3.79□□□□□ -1.8
U3KQE9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
U3KQE9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
U3KQE9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.79□□□□□ -1.8
U3KQE9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.79□□□□□ -1.8
U3KQE9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.79□□□□□ -1.8
U3KQE9 AC020895.1-201ENST00000595362 272 ntBASIC3.79□□□□□ -1.8
U3KQE9 AC006380.1-201ENST00000603598 186 ntBASIC3.79□□□□□ -1.8
U3KQE9 AL359198.2-201ENST00000611836 194 ntBASIC3.79□□□□□ -1.8
U3KQE9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.79□□□□□ -1.8
U3KQE9 AC004467.1-201ENST00000615678 330 ntBASIC3.79□□□□□ -1.8
U3KQE9 AC092628.2-201ENST00000622492 339 ntBASIC3.79□□□□□ -1.8
U3KQE9 AC018445.2-201ENST00000622987 260 ntBASIC3.79□□□□□ -1.8
U3KQE9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.79□□□□□ -1.8
U3KQE9 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
U3KQE9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
U3KQE9 ADAM3A-203ENST00000461344 2157 ntBASIC3.79□□□□□ -1.8
U3KQE9 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.79□□□□□ -1.8
U3KQE9 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
U3KQE9 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
U3KQE9 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.79□□□□□ -1.8
U3KQE9 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
U3KQE9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
U3KQE9 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
U3KQE9 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
U3KQE9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.78□□□□□ -1.8
U3KQE9 MAPK10-349ENST00000641767 3661 ntBASIC3.78□□□□□ -1.8
U3KQE9 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC3.78□□□□□ -1.8
U3KQE9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
U3KQE9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.78□□□□□ -1.8
U3KQE9 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
U3KQE9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
U3KQE9 RNU6-899P-201ENST00000363947 107 ntBASIC3.78□□□□□ -1.8
U3KQE9 SNORD116-14-201ENST00000383894 92 ntBASIC3.78□□□□□ -1.8
U3KQE9 SNORD116-17-201ENST00000383929 92 ntBASIC3.78□□□□□ -1.8
U3KQE9 SNORD116-15-201ENST00000384445 92 ntBASIC3.78□□□□□ -1.8
U3KQE9 SNORD116-19-201ENST00000384729 92 ntBASIC3.78□□□□□ -1.8
U3KQE9 MIR487A-201ENST00000385009 80 ntBASIC3.78□□□□□ -1.8
U3KQE9 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
U3KQE9 RNU6-381P-201ENST00000391259 108 ntBASIC3.78□□□□□ -1.8
U3KQE9 AL512633.1-201ENST00000399931 655 ntBASIC3.78□□□□□ -1.8
U3KQE9 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.78□□□□□ -1.8
U3KQE9 FAR2P2-201ENST00000413041 594 ntBASIC3.78□□□□□ -1.8
U3KQE9 AC009963.1-201ENST00000417265 157 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms