Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 AL162424.1-201ENST00000602325 221 ntBASIC4.82□□□□□ -1.64
HCN4Q9Y3Q4 SNORA51-201ENST00000606420 132 ntBASIC4.82□□□□□ -1.64
HCN4Q9Y3Q4 AC099506.2-201ENST00000623074 221 ntBASIC4.82□□□□□ -1.64
HCN4Q9Y3Q4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.82□□□□□ -1.64
HCN4Q9Y3Q4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.82□□□□□ -1.64
HCN4Q9Y3Q4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HCN4Q9Y3Q4 AL672167.1-204ENST00000641875 3017 ntBASIC4.82□□□□□ -1.64
HCN4Q9Y3Q4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HCN4Q9Y3Q4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
HCN4Q9Y3Q4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HCN4Q9Y3Q4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HCN4Q9Y3Q4 AC063976.2-201ENST00000425667 3556 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 AC126323.6-202ENST00000568092 3511 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 RNU6-222P-201ENST00000362438 107 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 Y_RNA.292-201ENST00000364904 97 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 RNY1P5-201ENST00000383890 115 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 SNORA2.3-201ENST00000383920 135 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 RNU6-968P-201ENST00000384076 107 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 SNORA70.10-201ENST00000384515 134 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 RNU1-139P-201ENST00000391307 165 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 RNA5SP31-201ENST00000411144 127 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 AC093578.1-201ENST00000415219 368 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 RPL7P47-201ENST00000497299 556 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 RN7SKP272-201ENST00000516988 232 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 AK6P2-201ENST00000549020 471 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 MIR4782-201ENST00000577987 79 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 MIR4282-201ENST00000583613 67 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 AC022726.1-201ENST00000587475 207 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 AC024153.1-201ENST00000603103 365 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 BRDTP1-201ENST00000605735 677 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HCN4Q9Y3Q4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 RNU6-1020P-201ENST00000363684 107 ntBASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 RNU6-740P-201ENST00000364734 105 ntBASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 RNU6-1286P-201ENST00000383871 107 ntBASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 RPS4XP3-201ENST00000398541 413 ntBASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 AL590383.1-201ENST00000428602 75 ntBASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 RPS15AP7-201ENST00000439294 405 ntBASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 CYCSP32-201ENST00000440548 321 ntBASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 BTF3P6-201ENST00000448054 499 ntBASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 SCARNA10-201ENST00000459255 330 ntBASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 RPL23AP65-201ENST00000475608 468 ntBASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 TRAV28-201ENST00000557548 323 ntBASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 MIR4423-201ENST00000580922 80 ntBASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 AC053481.4-201ENST00000583164 216 ntBASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 AC136601.2-201ENST00000604356 474 ntBASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 AC037487.3-201ENST00000606668 112 ntBASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 MIR6875-201ENST00000617506 72 ntBASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 AC087190.4-201ENST00000574616 8334 ntBASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 ZNF137P-201ENST00000456718 1920 ntBASIC4.8□□□□□ -1.64
HCN4Q9Y3Q4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 NOL8P1-201ENST00000508336 3529 ntBASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 RNA5SP119-201ENST00000362715 117 ntBASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 U3.15-201ENST00000365398 212 ntBASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 RNU6-843P-201ENST00000384454 104 ntBASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 MIR34B-201ENST00000385076 84 ntBASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 U3.37-201ENST00000408528 213 ntBASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 EIF1AXP1-201ENST00000419267 435 ntBASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 AL353705.4-201ENST00000449661 238 ntBASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 AC109925.1-201ENST00000478069 331 ntBASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 RPL31P13-201ENST00000484151 370 ntBASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 AC074198.2-201ENST00000508153 258 ntBASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 RPL23AP94-201ENST00000512518 302 ntBASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 RNU6-1278P-201ENST00000516130 107 ntBASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 RNU1-6P-201ENST00000516290 144 ntBASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 SNORA31.8-201ENST00000516327 108 ntBASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 MIR548AI-201ENST00000579940 88 ntBASIC4.79□□□□□ -1.64
HCN4Q9Y3Q4 AC011921.3-201ENST00000605540 361 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms