Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 RPL17P19-201ENST00000489069 552 ntBASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 RNU6-352P-201ENST00000516908 107 ntBASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 RNU6-677P-201ENST00000516914 101 ntBASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 RNU4-60P-201ENST00000517239 135 ntBASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 HSPE1P20-201ENST00000538133 289 ntBASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 MIR4425-201ENST00000580572 84 ntBASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 AC174048.1-201ENST00000603389 144 ntBASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 RNA5SP108-201ENST00000605921 117 ntBASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 uc_338.32-201ENST00000615087 172 ntBASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 AC141273.2-201ENST00000618989 130 ntBASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 AC008669.1-201ENST00000565823 2178 ntBASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.56□□□□□ -1.84
PACSIN3Q9UKS6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 Y_RNA.14-201ENST00000362415 103 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 RNU6-1062P-201ENST00000383908 107 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 MIR23B-201ENST00000384832 97 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 BX842559.1-201ENST00000419615 532 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 AL133396.1-201ENST00000432048 687 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 AC004866.2-201ENST00000438285 481 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 AC073910.1-201ENST00000445047 438 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 PCMTD1P1-201ENST00000455560 355 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 RPL23AP31-201ENST00000456160 467 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 RNU7-169P-201ENST00000459456 61 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 RNU7-138P-201ENST00000459479 64 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 RPL21P11-201ENST00000461458 483 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 RN7SL542P-201ENST00000467147 294 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 MTND3P25-201ENST00000509243 135 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 Y_RNA.673-201ENST00000516306 88 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 CBX3P8-201ENST00000532412 525 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 HSPE1P5-201ENST00000561489 272 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 RAC1P9-201ENST00000604990 392 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 MIR15A-201ENST00000607334 83 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 AL391261.4-201ENST00000616012 481 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 FAM91A3P-201ENST00000456826 2544 ntBASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.55□□□□□ -1.84
PACSIN3Q9UKS6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 RNU1-35P-201ENST00000362782 153 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 RNA5SP235-201ENST00000365411 114 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 RNU6-174P-201ENST00000410406 106 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 CKS1BP5-201ENST00000434172 273 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 AC073063.1-201ENST00000434352 607 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 AC090774.1-201ENST00000435925 246 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 FO393415.2-201ENST00000480085 343 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 AC110768.1-201ENST00000509222 400 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 RNU6-397P-201ENST00000516226 104 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 SNORA40.14-201ENST00000516543 86 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 IGKV2D-23-201ENST00000518179 286 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 AL355812.1-201ENST00000603215 216 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 HMGN2P28-201ENST00000606102 262 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 SNORA62.6-201ENST00000606322 83 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 AC096772.1-201ENST00000609146 564 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 AL355810.1-201ENST00000614629 552 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 MIR6130-201ENST00000619419 109 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 AL354798.1-201ENST00000622505 329 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 AC006065.5-201ENST00000623427 349 ntBASIC3.54□□□□□ -1.84
PACSIN3Q9UKS6 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms