Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 LINC01963-201ENST00000562038 3148 ntBASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 RN7SKP185-201ENST00000362813 326 ntBASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 CALM2P4-201ENST00000430810 426 ntBASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 AC023141.8-201ENST00000442554 208 ntBASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 AC099670.1-201ENST00000455141 783 ntBASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 RN7SL552P-201ENST00000462094 276 ntBASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 RN7SL269P-201ENST00000467795 305 ntBASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 Vault.1-201ENST00000516474 102 ntBASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 AC107934.2-201ENST00000518653 310 ntBASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 AC027419.1-201ENST00000522976 328 ntBASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 AL136360.1-201ENST00000503377 1900 ntBASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
FOXD4L1Q9NU39 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 Y_RNA.220-201ENST00000364244 109 ntBASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 SNORA70.6-201ENST00000383934 134 ntBASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 RNU6-440P-201ENST00000390882 105 ntBASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 RPL12P49-201ENST00000441100 121 ntBASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 AC114324.2-202ENST00000503812 134 ntBASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 MIR6780B-201ENST00000610307 79 ntBASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 Pinc.1-201ENST00000616452 154 ntBASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 LINC01613-201ENST00000561476 2780 ntBASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 ABCC13-202ENST00000463099 3842 ntBASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.86□□□□□ -1.31
FOXD4L1Q9NU39 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 RNA5SP326-201ENST00000363209 110 ntBASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 Y_RNA.111-201ENST00000363248 100 ntBASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 Y_RNA.203-201ENST00000364106 102 ntBASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 MIR191-201ENST00000384873 92 ntBASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 COX6CP6-201ENST00000490840 228 ntBASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 AC078817.1-201ENST00000492623 435 ntBASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 SNORA74.1-201ENST00000516320 180 ntBASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 RNA5SP441-201ENST00000516809 88 ntBASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 AL929325.1-201ENST00000603096 117 ntBASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 MIR6889-201ENST00000613185 59 ntBASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 AL589743.1-201ENST00000551932 2712 ntBASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 GVINP1-202ENST00000531871 7271 ntBASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
FOXD4L1Q9NU39 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 AL360270.2-201ENST00000562952 5985 ntBASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 RNU1-57P-201ENST00000384491 166 ntBASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 AL590004.2-201ENST00000404787 371 ntBASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 RNA5SP511-201ENST00000410487 115 ntBASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 AL035422.1-201ENST00000414193 397 ntBASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 KF459542.1-201ENST00000450908 553 ntBASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 AC137627.1-201ENST00000545761 289 ntBASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 AC106785.1-201ENST00000565935 262 ntBASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 MIR4753-201ENST00000585119 83 ntBASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 AL442128.1-201ENST00000615151 90 ntBASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
FOXD4L1Q9NU39 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
FOXD4L1Q9NU39 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
FOXD4L1Q9NU39 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
FOXD4L1Q9NU39 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXD4L1Q9NU39 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
FOXD4L1Q9NU39 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
FOXD4L1Q9NU39 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.83□□□□□ -1.32
FOXD4L1Q9NU39 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms