Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AP001005.3-201ENST00000622049 129 ntBASIC4.89□□□□□ -1.63
SNIP1Q8TAD8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.89□□□□□ -1.63
SNIP1Q8TAD8 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.89□□□□□ -1.63
SNIP1Q8TAD8 AC010266.2-201ENST00000564741 3255 ntBASIC4.89□□□□□ -1.63
SNIP1Q8TAD8 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNIP1Q8TAD8 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.89□□□□□ -1.63
SNIP1Q8TAD8 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
SNIP1Q8TAD8 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SNIP1Q8TAD8 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNIP1Q8TAD8 AC026523.2-201ENST00000625039 7739 ntBASIC4.89□□□□□ -1.63
SNIP1Q8TAD8 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.89□□□□□ -1.63
SNIP1Q8TAD8 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNIP1Q8TAD8 AL136164.4-201ENST00000625013 2135 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 CENPCP1-201ENST00000533085 2578 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 AC112198.2-201ENST00000426589 6996 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 AL672167.1-205ENST00000641112 3080 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 MIR526A2-201ENST00000390198 65 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 RNU6-1228P-201ENST00000391014 107 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 RNA5SP332-201ENST00000391063 115 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 AL512604.1-201ENST00000404812 257 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 RN7SKP27-201ENST00000410684 333 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 RPS29P10-201ENST00000439197 166 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 RPL34P20-201ENST00000442771 351 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 HMGB3P8-201ENST00000449709 577 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 AC006026.2-201ENST00000457376 180 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 RPL23AP70-201ENST00000483361 460 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 Y_RNA.692-201ENST00000516627 105 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 RNU2-12P-201ENST00000517216 168 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 AP000769.2-201ENST00000602344 396 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 AL162431.4-201ENST00000604674 411 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 AL356157.2-201ENST00000605122 111 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 AC004832.5-201ENST00000608677 401 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 AL121890.5-201ENST00000620848 304 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 AC012640.5-201ENST00000623897 319 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 AC010300.1-201ENST00000600671 5134 ntBASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNIP1Q8TAD8 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 RNU6-1285P-201ENST00000363480 105 ntBASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 RNU6-793P-201ENST00000384233 104 ntBASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 RNU6-880P-201ENST00000384526 107 ntBASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 RNU6-837P-201ENST00000391056 108 ntBASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 AC079780.1-201ENST00000428259 207 ntBASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 AC007919.1-201ENST00000429380 217 ntBASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 AL590399.6-201ENST00000446396 307 ntBASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 AP000705.1-201ENST00000454567 350 ntBASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 SNORD125-201ENST00000459538 96 ntBASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 AC091179.3-201ENST00000474761 144 ntBASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 HSPE1P4-201ENST00000550617 308 ntBASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 U6.99-201ENST00000637524 83 ntBASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 Z82209.1-201ENST00000422141 2135 ntBASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNIP1Q8TAD8 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 NEAT1-202ENST00000501122 22743 ntBASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 Y_RNA.229-201ENST00000364347 113 ntBASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 RNU1-140P-201ENST00000365040 165 ntBASIC4.86□□□□□ -1.63
SNIP1Q8TAD8 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms