Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 RNU6-1077P-201ENST00000410506 102 ntBASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 COTL1P1-201ENST00000422309 375 ntBASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 AC104332.2-201ENST00000429959 156 ntBASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 HMGB1P31-201ENST00000437242 427 ntBASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 RPL21P2-201ENST00000440049 481 ntBASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 WASF1P1-201ENST00000447560 1131 ntBASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 MTND3P16-201ENST00000452205 344 ntBASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 RPS29P26-201ENST00000477483 171 ntBASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 RNU6-358P-201ENST00000516564 75 ntBASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 MTND4P7-201ENST00000523876 130 ntBASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 EIF4BP1-201ENST00000554881 351 ntBASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 MIR1273C-201ENST00000578669 77 ntBASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 LARP7P3-201ENST00000579888 337 ntBASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 MIR3609-201ENST00000582661 80 ntBASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 FTX_3.1-201ENST00000610451 147 ntBASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
PCDH20Q8N6Y1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 Y_RNA.231-201ENST00000364358 102 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 RNU4-66P-201ENST00000365199 138 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 RNU6-715P-201ENST00000365204 103 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 RNU6-38P-201ENST00000384085 107 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 RNU2-68P-201ENST00000410878 191 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 MTCO3P18-201ENST00000440206 761 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 AL590639.1-201ENST00000456484 337 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 SCARNA18-201ENST00000459004 134 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 RNU6-333P-201ENST00000459117 107 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 AC116353.2-201ENST00000505332 712 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 AC091885.1-201ENST00000506658 268 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 CCDC34P1-201ENST00000507441 517 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 MIR548AC-201ENST00000585049 88 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 AC060780.3-201ENST00000589464 80 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 AC012119.1-201ENST00000603184 222 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 AL035413.2-201ENST00000604801 525 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 AC006111.3-201ENST00000622137 383 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 AC090617.7-201ENST00000623952 126 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 AL137790.1-201ENST00000634283 177 ntBASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PCDH20Q8N6Y1 Y_RNA.33-201ENST00000362591 102 ntBASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 RNU6-395P-201ENST00000365662 106 ntBASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 SNORA26.7-201ENST00000391288 122 ntBASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 RNA5SP344-201ENST00000411081 104 ntBASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 RNU6-373P-201ENST00000411247 98 ntBASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 SRIP2-201ENST00000428470 166 ntBASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 AL669831.1-202ENST00000428504 417 ntBASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 GTF2IP13-201ENST00000438487 386 ntBASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 RPS15AP27-201ENST00000449183 343 ntBASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 RPL12P25-201ENST00000455592 494 ntBASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 RPL21P99-201ENST00000480369 423 ntBASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 AC009901.1-201ENST00000506703 541 ntBASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 LRRC34P2-201ENST00000514850 553 ntBASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 RNU6-928P-201ENST00000516876 104 ntBASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 AC106782.4-201ENST00000568264 210 ntBASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 DUSP12P1-201ENST00000612874 516 ntBASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 AC006386.2-201ENST00000624491 75 ntBASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 AC012005.1-201ENST00000624575 75 ntBASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
PCDH20Q8N6Y1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDH20Q8N6Y1 RNU6-270P-201ENST00000364131 105 ntBASIC2.94□□□□□ -1.94
PCDH20Q8N6Y1 RNU6-7-201ENST00000364784 107 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms