Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 RNU6-336P-201ENST00000364891 107 ntBASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 RNU6-106P-201ENST00000384405 107 ntBASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 MIR135A2-201ENST00000384854 100 ntBASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 MIR487A-201ENST00000385009 80 ntBASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 SNORD78.1-201ENST00000390866 65 ntBASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 HSPE1P21-201ENST00000438283 308 ntBASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 RPL23AP24-201ENST00000458203 385 ntBASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 MIR3160-1-201ENST00000577972 85 ntBASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 MIR3939-201ENST00000582614 106 ntBASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 MIR6130-201ENST00000619419 109 ntBASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 MIR15B-201ENST00000385045 98 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 AL590762.2-201ENST00000395798 571 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 RNU6-554P-201ENST00000410466 106 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 EDDM3CP-201ENST00000415977 425 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 SSXP9-201ENST00000417503 292 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 AL391219.1-201ENST00000422570 483 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 RPL35AP21-201ENST00000437667 333 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 HSPE1P13-201ENST00000451143 297 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 AL133244.1-201ENST00000456007 258 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 AF186996.7-201ENST00000492781 209 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 AC015795.1-201ENST00000513669 327 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 HIGD1AP3-201ENST00000515857 278 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 RN7SKP12-201ENST00000516275 143 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 AC074050.1-201ENST00000563247 211 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 AC004832.5-201ENST00000608677 401 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 AP005019.3-201ENST00000620418 560 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 AC099654.7-201ENST00000635788 2127 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 MIR4496-201ENST00000635896 61 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 SMG1P4-204ENST00000523028 4131 ntBASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPAS3Q8IXF0 AC025031.4-201ENST00000621248 3271 ntBASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 SNORD115-32-201ENST00000364079 82 ntBASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 RNA5SP515-201ENST00000364570 118 ntBASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 MIR626-201ENST00000385032 94 ntBASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 MIR10A-201ENST00000385043 110 ntBASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 AL512604.1-201ENST00000404812 257 ntBASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 AC138623.1-201ENST00000418060 216 ntBASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 AC234781.4-201ENST00000419384 244 ntBASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 RPL21P66-201ENST00000426566 466 ntBASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 CYCSP32-201ENST00000440548 321 ntBASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 AC104164.2-201ENST00000496953 495 ntBASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 AC020593.1-201ENST00000507399 299 ntBASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 RNU6-513P-201ENST00000516104 104 ntBASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 RNU6-561P-201ENST00000516222 102 ntBASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 RNA5SP471-201ENST00000516971 106 ntBASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 MIR4782-201ENST00000577987 79 ntBASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 AL034408.1-202ENST00000636088 415 ntBASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NPAS3Q8IXF0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 AC021146.4-201ENST00000309229 279 ntBASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 SNORD14B-201ENST00000364533 90 ntBASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 Y_RNA.319-201ENST00000365138 92 ntBASIC4.84□□□□□ -1.63
NPAS3Q8IXF0 SNORA8.3-201ENST00000384679 139 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms