Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.23□□□□□ -2.05
CKAP4Q07065 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.23□□□□□ -2.05
CKAP4Q07065 APOOP1-201ENST00000604695 592 ntBASIC2.23□□□□□ -2.05
CKAP4Q07065 AP002360.4-201ENST00000606980 481 ntBASIC2.23□□□□□ -2.05
CKAP4Q07065 AC009161.2-201ENST00000624626 138 ntBASIC2.23□□□□□ -2.05
CKAP4Q07065 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CKAP4Q07065 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CKAP4Q07065 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CKAP4Q07065 DEFB108F-201ENST00000344638 222 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 Y_RNA.1-201ENST00000352915 104 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 RNU6-270P-201ENST00000364131 105 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 RNU5E-6P-201ENST00000365574 115 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 RNU1-39P-201ENST00000383897 165 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 RNU6-74P-201ENST00000384235 107 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 MIR558-201ENST00000384920 94 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 CALM2P3-201ENST00000400429 449 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 TXNP7-201ENST00000406296 293 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.22□□□□□ -2.05
CKAP4Q07065 RNU2-36P-201ENST00000410361 191 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.22□□□□□ -2.05
CKAP4Q07065 AL358075.3-201ENST00000426289 226 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 ISCA1P1-201ENST00000426679 387 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 MED13P1-201ENST00000428342 171 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.22□□□□□ -2.05
CKAP4Q07065 GPR143P-201ENST00000434155 205 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.22□□□□□ -2.05
CKAP4Q07065 AL714022.1-201ENST00000439897 151 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 AC079781.2-201ENST00000446424 169 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.22□□□□□ -2.05
CKAP4Q07065 AC003071.1-201ENST00000451219 789 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.22□□□□□ -2.05
CKAP4Q07065 SNORD97-201ENST00000459187 142 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 RPL31P60-201ENST00000478450 367 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 HSPE1P6-201ENST00000479457 291 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 AC023194.1-201ENST00000493084 308 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 EIF4EP3-201ENST00000498782 656 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.22□□□□□ -2.05
CKAP4Q07065 COX6CP5-201ENST00000527162 228 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.22□□□□□ -2.05
CKAP4Q07065 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.22□□□□□ -2.05
CKAP4Q07065 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.22□□□□□ -2.05
CKAP4Q07065 MIR3944-201ENST00000581277 108 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 MIR4448-201ENST00000584360 86 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 AF038458.1-201ENST00000588406 262 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 AC126118.1-201ENST00000607744 628 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 AC090517.2-201ENST00000614966 680 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 AL157786.1-207ENST00000627771 695 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 MIR6863-201ENST00000636112 90 ntBASIC2.22□□□□□ -2.05
CKAP4Q07065 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.21□□□□□ -2.05
CKAP4Q07065 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CKAP4Q07065 AL137003.2-201ENST00000606924 2538 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.21□□□□□ -2.06
CKAP4Q07065 RNU6-960P-201ENST00000364056 120 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
CKAP4Q07065 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CKAP4Q07065 RNU1-52P-201ENST00000384190 164 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 Y_RNA.554-201ENST00000384672 102 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 RPS4XP8-201ENST00000402039 771 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.21□□□□□ -2.06
CKAP4Q07065 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.21□□□□□ -2.06
CKAP4Q07065 MTATP6P18-201ENST00000417994 673 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.21□□□□□ -2.06
CKAP4Q07065 EIF1P1-201ENST00000421436 341 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.21□□□□□ -2.06
CKAP4Q07065 AC002486.1-201ENST00000435098 391 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 HMGB3P12-201ENST00000438745 556 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.21□□□□□ -2.06
CKAP4Q07065 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.21□□□□□ -2.06
CKAP4Q07065 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.21□□□□□ -2.06
CKAP4Q07065 RNU7-51P-201ENST00000516560 62 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 SCARNA16.3-201ENST00000516595 184 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 RNU6-410P-201ENST00000517006 107 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.21□□□□□ -2.06
CKAP4Q07065 MTND4LP26-201ENST00000518144 282 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.21□□□□□ -2.06
CKAP4Q07065 RPS3AP4-201ENST00000555161 764 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 SUB1P2-201ENST00000556401 297 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 AL359212.1-201ENST00000556608 614 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.21□□□□□ -2.06
CKAP4Q07065 MIR3921-201ENST00000577308 85 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.21□□□□□ -2.06
CKAP4Q07065 HMGB1P24-202ENST00000615653 685 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 AC005609.4-201ENST00000625071 447 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 SEPT14P19-203ENST00000633205 211 ntBASIC2.21□□□□□ -2.06
CKAP4Q07065 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CKAP4Q07065 AC062016.1-201ENST00000355719 319 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 RNU6-1120P-201ENST00000362988 108 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CKAP4Q07065 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.2□□□□□ -2.06
CKAP4Q07065 CIR1P3-201ENST00000405137 479 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 MIR548F1-201ENST00000408667 84 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 ZNF90P2-204ENST00000419323 1075 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 AL353193.1-201ENST00000421444 268 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CKAP4Q07065 USP9YP18-201ENST00000425912 695 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.2□□□□□ -2.06
CKAP4Q07065 RPL23AP30-201ENST00000432419 501 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 UBE2V1P8-201ENST00000437166 265 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms