Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.81□□□□□ -2.28
ABCA4P78363 PSMA6P3-201ENST00000428242 164 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.81□□□□□ -2.28
ABCA4P78363 RPL7P34-201ENST00000433316 712 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 SNRPEP9-201ENST00000436794 238 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.81□□□□□ -2.28
ABCA4P78363 DEFB108E-201ENST00000524692 240 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 AP003497.1-201ENST00000528472 562 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.81□□□□□ -2.28
ABCA4P78363 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.81□□□□□ -2.28
ABCA4P78363 AL512605.2-201ENST00000592972 256 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 AC024257.5-201ENST00000612739 531 ntBASIC0.81□□□□□ -2.28
ABCA4P78363 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.8□□□□□ -2.28
ABCA4P78363 AC009310.1-201ENST00000414414 451 ntBASIC0.8□□□□□ -2.28
ABCA4P78363 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.8□□□□□ -2.28
ABCA4P78363 AC244636.1-201ENST00000421152 228 ntBASIC0.8□□□□□ -2.28
ABCA4P78363 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.8□□□□□ -2.28
ABCA4P78363 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.8□□□□□ -2.28
ABCA4P78363 FABP5P14-201ENST00000437273 393 ntBASIC0.8□□□□□ -2.28
ABCA4P78363 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.8□□□□□ -2.28
ABCA4P78363 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.8□□□□□ -2.28
ABCA4P78363 AC124293.1-201ENST00000530034 493 ntBASIC0.8□□□□□ -2.28
ABCA4P78363 NACAP3-201ENST00000552100 481 ntBASIC0.8□□□□□ -2.28
ABCA4P78363 AC021739.1-201ENST00000559631 174 ntBASIC0.8□□□□□ -2.28
ABCA4P78363 AP005229.2-201ENST00000609980 697 ntBASIC0.8□□□□□ -2.28
ABCA4P78363 AC003001.2-201ENST00000616294 831 ntBASIC0.8□□□□□ -2.28
ABCA4P78363 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.8□□□□□ -2.28
ABCA4P78363 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.8□□□□□ -2.28
ABCA4P78363 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
ABCA4P78363 RNU1-58P-201ENST00000362413 163 ntBASIC0.8□□□□□ -2.28
ABCA4P78363 SNORA27.3-201ENST00000364937 134 ntBASIC0.8□□□□□ -2.28
ABCA4P78363 MIR518A2-201ENST00000384966 87 ntBASIC0.8□□□□□ -2.28
ABCA4P78363 MIR561-201ENST00000385216 97 ntBASIC0.8□□□□□ -2.28
ABCA4P78363 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.8□□□□□ -2.28
ABCA4P78363 CST2P1-201ENST00000425770 87 ntBASIC0.8□□□□□ -2.28
ABCA4P78363 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.8□□□□□ -2.28
ABCA4P78363 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.8□□□□□ -2.28
ABCA4P78363 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.8□□□□□ -2.28
ABCA4P78363 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.8□□□□□ -2.28
ABCA4P78363 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.8□□□□□ -2.28
ABCA4P78363 AP001025.1-201ENST00000486139 332 ntBASIC0.8□□□□□ -2.28
ABCA4P78363 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.8□□□□□ -2.28
ABCA4P78363 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.8□□□□□ -2.28
ABCA4P78363 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
ABCA4P78363 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.8□□□□□ -2.28
ABCA4P78363 SNRPGP17-201ENST00000603780 214 ntBASIC0.8□□□□□ -2.28
ABCA4P78363 CYP2C61P-201ENST00000604072 290 ntBASIC0.8□□□□□ -2.28
ABCA4P78363 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
ABCA4P78363 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.79□□□□□ -2.28
ABCA4P78363 SNORD114-23-201ENST00000363536 72 ntBASIC0.79□□□□□ -2.28
ABCA4P78363 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
ABCA4P78363 RNU6-40P-201ENST00000384254 107 ntBASIC0.79□□□□□ -2.28
ABCA4P78363 Y_RNA.518-201ENST00000384552 113 ntBASIC0.79□□□□□ -2.28
ABCA4P78363 HMGN2P39-201ENST00000398005 273 ntBASIC0.79□□□□□ -2.28
ABCA4P78363 AC007742.1-201ENST00000425789 329 ntBASIC0.79□□□□□ -2.28
ABCA4P78363 AC093422.3-201ENST00000428506 305 ntBASIC0.79□□□□□ -2.28
ABCA4P78363 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.79□□□□□ -2.28
ABCA4P78363 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.79□□□□□ -2.28
ABCA4P78363 ELOCP26-201ENST00000436067 329 ntBASIC0.79□□□□□ -2.28
ABCA4P78363 AC092989.1-201ENST00000481235 277 ntBASIC0.79□□□□□ -2.28
ABCA4P78363 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.79□□□□□ -2.28
ABCA4P78363 RNU6-416P-201ENST00000516265 103 ntBASIC0.79□□□□□ -2.28
ABCA4P78363 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.79□□□□□ -2.28
ABCA4P78363 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.79□□□□□ -2.28
ABCA4P78363 UBE2L4-201ENST00000587688 464 ntBASIC0.79□□□□□ -2.28
ABCA4P78363 AP000403.1-201ENST00000603349 851 ntBASIC0.79□□□□□ -2.28
ABCA4P78363 AP003973.1-201ENST00000604639 691 ntBASIC0.79□□□□□ -2.28
ABCA4P78363 AC091946.2-201ENST00000606105 291 ntBASIC0.79□□□□□ -2.28
ABCA4P78363 RNU6-91P-201ENST00000607774 107 ntBASIC0.79□□□□□ -2.28
ABCA4P78363 AC007742.2-201ENST00000618226 398 ntBASIC0.79□□□□□ -2.28
ABCA4P78363 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.79□□□□□ -2.28
ABCA4P78363 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.79□□□□□ -2.28
ABCA4P78363 CBX3P1-201ENST00000325243 554 ntBASIC0.78□□□□□ -2.28
ABCA4P78363 Y_RNA.258-201ENST00000364613 105 ntBASIC0.78□□□□□ -2.28
ABCA4P78363 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.78□□□□□ -2.28
ABCA4P78363 OR6C66P-201ENST00000414917 930 ntBASIC0.78□□□□□ -2.28
ABCA4P78363 USP9YP24-201ENST00000434374 697 ntBASIC0.78□□□□□ -2.28
ABCA4P78363 AL596276.1-201ENST00000434465 418 ntBASIC0.78□□□□□ -2.28
ABCA4P78363 AL353718.1-201ENST00000451028 517 ntBASIC0.78□□□□□ -2.28
ABCA4P78363 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.78□□□□□ -2.28
ABCA4P78363 EIF1AXP2-201ENST00000555940 413 ntBASIC0.78□□□□□ -2.28
ABCA4P78363 AL356432.3-201ENST00000568952 465 ntBASIC0.78□□□□□ -2.28
ABCA4P78363 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.78□□□□□ -2.28
ABCA4P78363 MIR338-201ENST00000636369 67 ntBASIC0.78□□□□□ -2.28
ABCA4P78363 Y_RNA.167-201ENST00000363735 109 ntBASIC0.78□□□□□ -2.28
ABCA4P78363 RNA5SP212-201ENST00000391223 107 ntBASIC0.78□□□□□ -2.28
ABCA4P78363 AL591704.2-201ENST00000421658 181 ntBASIC0.78□□□□□ -2.28
ABCA4P78363 CR848007.2-201ENST00000424918 787 ntBASIC0.78□□□□□ -2.28
ABCA4P78363 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.78□□□□□ -2.28
ABCA4P78363 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.78□□□□□ -2.28
ABCA4P78363 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.78□□□□□ -2.28
ABCA4P78363 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.78□□□□□ -2.28
ABCA4P78363 AC084024.2-201ENST00000503480 791 ntBASIC0.78□□□□□ -2.28
ABCA4P78363 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.78□□□□□ -2.28
ABCA4P78363 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.78□□□□□ -2.28
ABCA4P78363 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.78□□□□□ -2.28
ABCA4P78363 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
ABCA4P78363 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.78□□□□□ -2.28
ABCA4P78363 AC093519.1-201ENST00000566109 298 ntBASIC0.78□□□□□ -2.28
ABCA4P78363 ADAM3B-201ENST00000569937 840 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms