Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.79□□□□□ -2.28
LSM3P62310 AC009237.15-201ENST00000610252 501 ntBASIC0.79□□□□□ -2.28
LSM3P62310 AL121890.5-201ENST00000620848 304 ntBASIC0.79□□□□□ -2.28
LSM3P62310 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
LSM3P62310 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
LSM3P62310 TEX21P-201ENST00000447107 1476 ntBASIC0.79□□□□□ -2.28
LSM3P62310 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
LSM3P62310 MTND5P9-201ENST00000503854 1755 ntBASIC0.78□□□□□ -2.28
LSM3P62310 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.78□□□□□ -2.28
LSM3P62310 SNORA7.1-201ENST00000363750 139 ntBASIC0.78□□□□□ -2.28
LSM3P62310 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
LSM3P62310 RNU6-743P-201ENST00000364151 106 ntBASIC0.78□□□□□ -2.28
LSM3P62310 RNU6-114P-201ENST00000384704 105 ntBASIC0.78□□□□□ -2.28
LSM3P62310 RNU6-1300P-201ENST00000391046 108 ntBASIC0.78□□□□□ -2.28
LSM3P62310 HMGB3P12-201ENST00000438745 556 ntBASIC0.78□□□□□ -2.28
LSM3P62310 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.78□□□□□ -2.28
LSM3P62310 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.78□□□□□ -2.28
LSM3P62310 AC020550.1-201ENST00000447385 163 ntBASIC0.78□□□□□ -2.28
LSM3P62310 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
LSM3P62310 MTND5P8-201ENST00000449817 1083 ntBASIC0.78□□□□□ -2.28
LSM3P62310 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
LSM3P62310 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.78□□□□□ -2.28
LSM3P62310 AC087343.1-201ENST00000477341 475 ntBASIC0.78□□□□□ -2.28
LSM3P62310 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC0.78□□□□□ -2.28
LSM3P62310 RNU7-40P-201ENST00000516397 64 ntBASIC0.78□□□□□ -2.28
LSM3P62310 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.78□□□□□ -2.28
LSM3P62310 CBX3P8-201ENST00000532412 525 ntBASIC0.78□□□□□ -2.28
LSM3P62310 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.78□□□□□ -2.28
LSM3P62310 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.78□□□□□ -2.28
LSM3P62310 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.78□□□□□ -2.28
LSM3P62310 MIR4666A-201ENST00000580160 79 ntBASIC0.78□□□□□ -2.28
LSM3P62310 AC004492.1-201ENST00000607036 742 ntBASIC0.78□□□□□ -2.28
LSM3P62310 AL353770.2-201ENST00000620024 78 ntBASIC0.78□□□□□ -2.28
LSM3P62310 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.78□□□□□ -2.28
LSM3P62310 MIR6852-201ENST00000621699 66 ntBASIC0.78□□□□□ -2.28
LSM3P62310 SCARNA15.3-201ENST00000626315 122 ntBASIC0.78□□□□□ -2.28
LSM3P62310 SCARNA4.1-201ENST00000628597 123 ntBASIC0.78□□□□□ -2.28
LSM3P62310 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.78□□□□□ -2.28
LSM3P62310 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
LSM3P62310 RNU6-457P-201ENST00000363999 107 ntBASIC0.77□□□□□ -2.29
LSM3P62310 SNORD1A-201ENST00000364968 72 ntBASIC0.77□□□□□ -2.29
LSM3P62310 RNU6-898P-201ENST00000365627 104 ntBASIC0.77□□□□□ -2.29
LSM3P62310 RNU6-611P-201ENST00000384276 104 ntBASIC0.77□□□□□ -2.29
LSM3P62310 RNU4-27P-201ENST00000410889 139 ntBASIC0.77□□□□□ -2.29
LSM3P62310 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.77□□□□□ -2.29
LSM3P62310 SNRPEP10-201ENST00000420249 274 ntBASIC0.77□□□□□ -2.29
LSM3P62310 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.77□□□□□ -2.29
LSM3P62310 MTCO2P5-201ENST00000422621 426 ntBASIC0.77□□□□□ -2.29
LSM3P62310 OOSP1P1-201ENST00000423265 274 ntBASIC0.77□□□□□ -2.29
LSM3P62310 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.77□□□□□ -2.29
LSM3P62310 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.77□□□□□ -2.29
LSM3P62310 MTCYBP43-201ENST00000513621 740 ntBASIC0.77□□□□□ -2.29
LSM3P62310 RNU6-1261P-201ENST00000517194 104 ntBASIC0.77□□□□□ -2.29
LSM3P62310 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.77□□□□□ -2.29
LSM3P62310 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.77□□□□□ -2.29
LSM3P62310 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.77□□□□□ -2.29
LSM3P62310 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.77□□□□□ -2.29
LSM3P62310 WISP1-OT1-201ENST00000602893 642 ntBASIC0.77□□□□□ -2.29
LSM3P62310 AC106800.4-201ENST00000614905 153 ntBASIC0.77□□□□□ -2.29
LSM3P62310 MIR6134-201ENST00000617606 109 ntBASIC0.77□□□□□ -2.29
LSM3P62310 U6.99-201ENST00000637524 83 ntBASIC0.77□□□□□ -2.29
LSM3P62310 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
LSM3P62310 AC092125.1-201ENST00000562568 1995 ntBASIC0.76□□□□□ -2.29
LSM3P62310 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.76□□□□□ -2.29
LSM3P62310 RNU6-944P-201ENST00000364023 107 ntBASIC0.76□□□□□ -2.29
LSM3P62310 MIR506-201ENST00000384998 124 ntBASIC0.76□□□□□ -2.29
LSM3P62310 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.76□□□□□ -2.29
LSM3P62310 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.76□□□□□ -2.29
LSM3P62310 ISCA1P1-201ENST00000426679 387 ntBASIC0.76□□□□□ -2.29
LSM3P62310 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.76□□□□□ -2.29
LSM3P62310 MTCO1P44-201ENST00000441935 243 ntBASIC0.76□□□□□ -2.29
LSM3P62310 AL096829.2-201ENST00000446582 742 ntBASIC0.76□□□□□ -2.29
LSM3P62310 AC245102.2-201ENST00000448956 180 ntBASIC0.76□□□□□ -2.29
LSM3P62310 HMGN2P18-201ENST00000450680 270 ntBASIC0.76□□□□□ -2.29
LSM3P62310 RPL23AP35-201ENST00000451906 501 ntBASIC0.76□□□□□ -2.29
LSM3P62310 RPL30P7-201ENST00000479312 323 ntBASIC0.76□□□□□ -2.29
LSM3P62310 AP001025.1-201ENST00000486139 332 ntBASIC0.76□□□□□ -2.29
LSM3P62310 AC108729.1-201ENST00000487812 947 ntBASIC0.76□□□□□ -2.29
LSM3P62310 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.76□□□□□ -2.29
LSM3P62310 RNU1-41P-201ENST00000516161 162 ntBASIC0.76□□□□□ -2.29
LSM3P62310 RNU1-48P-201ENST00000516400 162 ntBASIC0.76□□□□□ -2.29
LSM3P62310 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.76□□□□□ -2.29
LSM3P62310 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.76□□□□□ -2.29
LSM3P62310 AC025811.1-201ENST00000604312 472 ntBASIC0.76□□□□□ -2.29
LSM3P62310 AP000860.1-201ENST00000605250 559 ntBASIC0.76□□□□□ -2.29
LSM3P62310 AC012360.2-201ENST00000609349 391 ntBASIC0.76□□□□□ -2.29
LSM3P62310 AL157834.3-201ENST00000615543 103 ntBASIC0.76□□□□□ -2.29
LSM3P62310 AL136313.1-201ENST00000624804 202 ntBASIC0.76□□□□□ -2.29
LSM3P62310 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
LSM3P62310 PAPPA-AS1-201ENST00000445861 2450 ntBASIC0.75□□□□□ -2.29
LSM3P62310 Y_RNA.25-201ENST00000362528 102 ntBASIC0.75□□□□□ -2.29
LSM3P62310 RNU6-188P-201ENST00000364207 107 ntBASIC0.75□□□□□ -2.29
LSM3P62310 RNU6-546P-201ENST00000383991 107 ntBASIC0.75□□□□□ -2.29
LSM3P62310 AL590084.2-201ENST00000401481 382 ntBASIC0.75□□□□□ -2.29
LSM3P62310 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
LSM3P62310 MIR1289-2-201ENST00000408360 111 ntBASIC0.75□□□□□ -2.29
LSM3P62310 NCOR1P3-201ENST00000420479 303 ntBASIC0.75□□□□□ -2.29
LSM3P62310 RPS6P15-201ENST00000431996 751 ntBASIC0.75□□□□□ -2.29
LSM3P62310 AC114878.1-201ENST00000441166 358 ntBASIC0.75□□□□□ -2.29
LSM3P62310 AC109927.2-201ENST00000506416 303 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms