Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NEK3P51956 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NEK3P51956 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
NEK3P51956 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NEK3P51956 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
NEK3P51956 AC032011.1-201ENST00000611703 1549 ntBASIC3.44□□□□□ -1.86
NEK3P51956 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NEK3P51956 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.43□□□□□ -1.86
NEK3P51956 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.43□□□□□ -1.86
NEK3P51956 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
NEK3P51956 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.43□□□□□ -1.86
NEK3P51956 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NEK3P51956 Y_RNA.38-201ENST00000362617 102 ntBASIC3.43□□□□□ -1.86
NEK3P51956 SNORD56.3-201ENST00000363507 71 ntBASIC3.43□□□□□ -1.86
NEK3P51956 RNU6-534P-201ENST00000364877 106 ntBASIC3.43□□□□□ -1.86
NEK3P51956 RNU4-20P-201ENST00000365601 151 ntBASIC3.43□□□□□ -1.86
NEK3P51956 U3.19-201ENST00000390893 196 ntBASIC3.43□□□□□ -1.86
NEK3P51956 SNORD115-47-201ENST00000391226 86 ntBASIC3.43□□□□□ -1.86
NEK3P51956 U3.26-201ENST00000391236 204 ntBASIC3.43□□□□□ -1.86
NEK3P51956 POLHP1-201ENST00000411806 470 ntBASIC3.43□□□□□ -1.86
NEK3P51956 BX323014.1-201ENST00000412876 237 ntBASIC3.43□□□□□ -1.86
NEK3P51956 Z99755.1-201ENST00000414048 380 ntBASIC3.43□□□□□ -1.86
NEK3P51956 AL356968.1-201ENST00000416622 474 ntBASIC3.43□□□□□ -1.86
NEK3P51956 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.43□□□□□ -1.86
NEK3P51956 AL365400.1-201ENST00000431854 640 ntBASIC3.43□□□□□ -1.86
NEK3P51956 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.43□□□□□ -1.86
NEK3P51956 RPL23AP83-201ENST00000434984 473 ntBASIC3.43□□□□□ -1.86
NEK3P51956 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.43□□□□□ -1.86
NEK3P51956 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.43□□□□□ -1.86
NEK3P51956 RPS3AP12-201ENST00000443616 753 ntBASIC3.43□□□□□ -1.86
NEK3P51956 RNU6-1208P-201ENST00000459588 107 ntBASIC3.43□□□□□ -1.86
NEK3P51956 AC107626.1-201ENST00000471084 183 ntBASIC3.43□□□□□ -1.86
NEK3P51956 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NEK3P51956 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.43□□□□□ -1.86
NEK3P51956 MRPS36P2-201ENST00000512569 299 ntBASIC3.43□□□□□ -1.86
NEK3P51956 RNU5F-8P-201ENST00000515941 111 ntBASIC3.43□□□□□ -1.86
NEK3P51956 SNORA64.4-201ENST00000516632 81 ntBASIC3.43□□□□□ -1.86
NEK3P51956 MTND4LP26-201ENST00000518144 282 ntBASIC3.43□□□□□ -1.86
NEK3P51956 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.43□□□□□ -1.86
NEK3P51956 CR383656.8-201ENST00000549046 145 ntBASIC3.43□□□□□ -1.86
NEK3P51956 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.43□□□□□ -1.86
NEK3P51956 SNORA59B-202ENST00000578183 701 ntBASIC3.43□□□□□ -1.86
NEK3P51956 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.43□□□□□ -1.86
NEK3P51956 AC024153.1-201ENST00000603103 365 ntBASIC3.43□□□□□ -1.86
NEK3P51956 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.43□□□□□ -1.86
NEK3P51956 AC099778.2-201ENST00000610904 211 ntBASIC3.43□□□□□ -1.86
NEK3P51956 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.43□□□□□ -1.86
NEK3P51956 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.43□□□□□ -1.86
NEK3P51956 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.43□□□□□ -1.86
NEK3P51956 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
NEK3P51956 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
NEK3P51956 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
NEK3P51956 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
NEK3P51956 AC121333.1-201ENST00000567488 2709 ntBASIC3.42□□□□□ -1.86
NEK3P51956 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
NEK3P51956 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.42□□□□□ -1.86
NEK3P51956 AL356274.2-201ENST00000624379 3752 ntBASIC3.42□□□□□ -1.86
NEK3P51956 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
NEK3P51956 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.42□□□□□ -1.86
NEK3P51956 MIR148B-201ENST00000362252 99 ntBASIC3.42□□□□□ -1.86
NEK3P51956 RNU6-266P-201ENST00000364225 107 ntBASIC3.42□□□□□ -1.86
NEK3P51956 SNORA68.1-201ENST00000364537 132 ntBASIC3.42□□□□□ -1.86
NEK3P51956 SNORD21-201ENST00000383953 95 ntBASIC3.42□□□□□ -1.86
NEK3P51956 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.42□□□□□ -1.86
NEK3P51956 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.42□□□□□ -1.86
NEK3P51956 PGBD4P6-201ENST00000421501 610 ntBASIC3.42□□□□□ -1.86
NEK3P51956 AC005326.1-201ENST00000429197 123 ntBASIC3.42□□□□□ -1.86
NEK3P51956 AL671855.1-201ENST00000446875 1203 ntBASIC3.42□□□□□ -1.86
NEK3P51956 RPL23AP67-201ENST00000465341 474 ntBASIC3.42□□□□□ -1.86
NEK3P51956 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.42□□□□□ -1.86
NEK3P51956 AC114781.4-201ENST00000513707 639 ntBASIC3.42□□□□□ -1.86
NEK3P51956 Y_RNA.687-201ENST00000516558 91 ntBASIC3.42□□□□□ -1.86
NEK3P51956 SCARNA20.6-201ENST00000517251 106 ntBASIC3.42□□□□□ -1.86
NEK3P51956 AC109479.2-201ENST00000517842 174 ntBASIC3.42□□□□□ -1.86
NEK3P51956 RPL7P20-201ENST00000520308 745 ntBASIC3.42□□□□□ -1.86
NEK3P51956 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.42□□□□□ -1.86
NEK3P51956 GLYCAM1-201ENST00000546596 285 ntBASIC3.42□□□□□ -1.86
NEK3P51956 AC078814.3-201ENST00000553036 491 ntBASIC3.42□□□□□ -1.86
NEK3P51956 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.42□□□□□ -1.86
NEK3P51956 AC009163.5-201ENST00000575421 637 ntBASIC3.42□□□□□ -1.86
NEK3P51956 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.42□□□□□ -1.86
NEK3P51956 MIR4276-201ENST00000584832 70 ntBASIC3.42□□□□□ -1.86
NEK3P51956 AL670379.10-201ENST00000604330 253 ntBASIC3.42□□□□□ -1.86
NEK3P51956 AL161756.2-201ENST00000604597 246 ntBASIC3.42□□□□□ -1.86
NEK3P51956 AL670379.9-201ENST00000605428 253 ntBASIC3.42□□□□□ -1.86
NEK3P51956 RNU6-89P-201ENST00000606519 100 ntBASIC3.42□□□□□ -1.86
NEK3P51956 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NEK3P51956 MIR3529-201ENST00000637713 78 ntBASIC3.42□□□□□ -1.86
NEK3P51956 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NEK3P51956 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NEK3P51956 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.42□□□□□ -1.86
NEK3P51956 Z83843.1-201ENST00000604070 3685 ntBASIC3.42□□□□□ -1.86
NEK3P51956 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
NEK3P51956 FAM35CP-201ENST00000554755 2470 ntBASIC3.42□□□□□ -1.86
NEK3P51956 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NEK3P51956 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
NEK3P51956 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NEK3P51956 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
NEK3P51956 AC010329.5-201ENST00000623497 2174 ntBASIC3.41□□□□□ -1.86
NEK3P51956 RNU6-942P-201ENST00000363002 107 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms