Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC079248.2-201ENST00000623779 326 ntBASIC1.9□□□□□ -2.11
CX3CR1P49238 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CX3CR1P49238 AC092104.1-201ENST00000497346 1441 ntBASIC1.9□□□□□ -2.11
CX3CR1P49238 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CX3CR1P49238 AC006020.1-201ENST00000420179 1854 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 HSPE1P11-201ENST00000339579 310 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 Y_RNA.534-201ENST00000384599 112 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 SNORA48.3-201ENST00000391081 134 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 U3.40-201ENST00000408706 208 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 Y_RNA.608-201ENST00000410647 95 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.89□□□□□ -2.11
CX3CR1P49238 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.89□□□□□ -2.11
CX3CR1P49238 AL160275.3-201ENST00000423876 471 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 AL356583.2-201ENST00000426536 280 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.89□□□□□ -2.11
CX3CR1P49238 RPL7P34-201ENST00000433316 712 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 AL591212.2-201ENST00000433923 257 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 HMGB3P12-201ENST00000438745 556 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 AC009238.1-201ENST00000442165 424 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 AC009237.6-201ENST00000446969 424 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 AL133217.1-201ENST00000450980 425 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 AC093899.1-201ENST00000457984 376 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 AL139824.2-201ENST00000458731 1095 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 RNU6-717P-201ENST00000459076 104 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 RPS3AP22-201ENST00000488297 769 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 RNU1-40P-201ENST00000516816 164 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 RNU1-97P-201ENST00000516872 164 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.89□□□□□ -2.11
CX3CR1P49238 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.89□□□□□ -2.11
CX3CR1P49238 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.89□□□□□ -2.11
CX3CR1P49238 HMGN1P30-201ENST00000589286 268 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 AC022893.3-201ENST00000607665 437 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 AC130324.3-201ENST00000614165 542 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 FRG1KP-201ENST00000623592 341 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 AP003400.5-201ENST00000624827 617 ntBASIC1.89□□□□□ -2.11
CX3CR1P49238 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.89□□□□□ -2.11
CX3CR1P49238 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.89□□□□□ -2.11
CX3CR1P49238 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CX3CR1P49238 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CX3CR1P49238 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.88□□□□□ -2.11
CX3CR1P49238 RNA5SP240-201ENST00000365355 128 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 RNU5E-6P-201ENST00000365574 115 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
CX3CR1P49238 SNORA40C-201ENST00000391285 128 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 RNU6-1025P-201ENST00000410629 104 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.88□□□□□ -2.11
CX3CR1P49238 EDDM3CP-201ENST00000415977 425 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.88□□□□□ -2.11
CX3CR1P49238 AIMP1P2-201ENST00000425294 312 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 AL591704.1-201ENST00000432574 275 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 AL161788.1-201ENST00000441805 169 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 AL078601.1-201ENST00000444542 271 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 PSPHP1-201ENST00000450062 261 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 CYP2C59P-201ENST00000457790 269 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 AC025033.1-201ENST00000463883 194 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 RAP1BP2-201ENST00000478270 544 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 AP000797.1-201ENST00000478870 387 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 RPS27P21-201ENST00000486977 252 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 RNU5B-3P-201ENST00000516601 115 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 RNU6-914P-201ENST00000516749 109 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 RNA5SP337-201ENST00000517007 109 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 RNU6-232P-201ENST00000517144 64 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.88□□□□□ -2.11
CX3CR1P49238 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CX3CR1P49238 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.88□□□□□ -2.11
CX3CR1P49238 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.88□□□□□ -2.11
CX3CR1P49238 AL158211.1-201ENST00000566763 763 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 SNORD53-201ENST00000579969 78 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.88□□□□□ -2.11
CX3CR1P49238 AL670379.10-201ENST00000604330 253 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 AL670379.9-201ENST00000605428 253 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 AC138749.5-201ENST00000611461 208 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 AC022202.1-201ENST00000613515 211 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 AP001486.3-201ENST00000615334 372 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 AC116165.2-201ENST00000616705 206 ntBASIC1.88□□□□□ -2.11
CX3CR1P49238 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.88□□□□□ -2.11
CX3CR1P49238 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CX3CR1P49238 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.88□□□□□ -2.11
CX3CR1P49238 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CX3CR1P49238 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CX3CR1P49238 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CX3CR1P49238 AC138393.1-203ENST00000327086 343 ntBASIC1.87□□□□□ -2.11
CX3CR1P49238 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CX3CR1P49238 RNU6-39P-201ENST00000384344 107 ntBASIC1.87□□□□□ -2.11
CX3CR1P49238 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.87□□□□□ -2.11
CX3CR1P49238 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.87□□□□□ -2.11
CX3CR1P49238 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.87□□□□□ -2.11
CX3CR1P49238 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CX3CR1P49238 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.87□□□□□ -2.11
CX3CR1P49238 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.87□□□□□ -2.11
CX3CR1P49238 FABP5P13-201ENST00000452144 328 ntBASIC1.87□□□□□ -2.11
CX3CR1P49238 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.87□□□□□ -2.11
CX3CR1P49238 SSXP1-201ENST00000453640 473 ntBASIC1.87□□□□□ -2.11
CX3CR1P49238 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.87□□□□□ -2.11
CX3CR1P49238 MTND4P2-201ENST00000507767 1203 ntBASIC1.87□□□□□ -2.11
CX3CR1P49238 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.87□□□□□ -2.11
CX3CR1P49238 SCARNA16.3-201ENST00000516595 184 ntBASIC1.87□□□□□ -2.11
CX3CR1P49238 RNU6-677P-201ENST00000516914 101 ntBASIC1.87□□□□□ -2.11
CX3CR1P49238 RNU6-1092P-201ENST00000516955 87 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms