Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 RNU6-25P-201ENST00000383873 107 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 RNU6-1-201ENST00000383898 107 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 RNU6-48P-201ENST00000384161 107 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 RNU6-36P-201ENST00000384172 107 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 RNU6-4P-201ENST00000384205 107 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 RNU6-5P-201ENST00000384238 107 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 RNU6-3P-201ENST00000384314 107 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 RNU6-16P-201ENST00000384385 107 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 RNU6-15P-201ENST00000384534 107 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 RNU6-2-201ENST00000384627 107 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 RNU6-29P-201ENST00000384637 107 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 RNU6-9-201ENST00000384776 107 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
FOXS1O43638 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
FOXS1O43638 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.65□□□□□ -1.83
FOXS1O43638 RNA5SP494-201ENST00000410653 129 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 CYCSP19-201ENST00000411715 316 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 SNORD56-201ENST00000413522 71 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
FOXS1O43638 SDAD1P3-201ENST00000427380 333 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 AC087650.1-201ENST00000431445 468 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.65□□□□□ -1.83
FOXS1O43638 AC067942.3-201ENST00000512025 362 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.65□□□□□ -1.83
FOXS1O43638 AF186190.1-201ENST00000517470 480 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.65□□□□□ -1.83
FOXS1O43638 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
FOXS1O43638 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.65□□□□□ -1.83
FOXS1O43638 AC034105.4-201ENST00000568304 277 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 AC130289.1-201ENST00000577321 73 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 AC087499.8-201ENST00000578406 226 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 AC006557.5-201ENST00000603126 811 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 AL161798.1-201ENST00000604630 131 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 RNU6-6P-201ENST00000606623 107 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 AC004852.3-201ENST00000614131 326 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 AC131238.1-201ENST00000617135 328 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.65□□□□□ -1.83
FOXS1O43638 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.65□□□□□ -1.83
FOXS1O43638 AC243829.7-201ENST00000633081 225 ntBASIC3.65□□□□□ -1.83
FOXS1O43638 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
FOXS1O43638 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
FOXS1O43638 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
FOXS1O43638 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
FOXS1O43638 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
FOXS1O43638 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
FOXS1O43638 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
FOXS1O43638 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
FOXS1O43638 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.64□□□□□ -1.83
FOXS1O43638 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.64□□□□□ -1.83
FOXS1O43638 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
FOXS1O43638 AL391987.6-201ENST00000305671 199 ntBASIC3.64□□□□□ -1.83
FOXS1O43638 MIR412-201ENST00000362142 91 ntBASIC3.64□□□□□ -1.83
FOXS1O43638 RNU5A-1-201ENST00000362698 116 ntBASIC3.64□□□□□ -1.83
FOXS1O43638 RNU6-1074P-201ENST00000383995 104 ntBASIC3.64□□□□□ -1.83
FOXS1O43638 RNU6-356P-201ENST00000384140 107 ntBASIC3.64□□□□□ -1.83
FOXS1O43638 Y_RNA.458-201ENST00000384240 102 ntBASIC3.64□□□□□ -1.83
FOXS1O43638 RN7SKP156-201ENST00000410308 342 ntBASIC3.64□□□□□ -1.83
FOXS1O43638 RN7SKP202-201ENST00000410439 330 ntBASIC3.64□□□□□ -1.83
FOXS1O43638 RNA5SP104-201ENST00000410989 118 ntBASIC3.64□□□□□ -1.83
FOXS1O43638 AL592148.1-201ENST00000413568 445 ntBASIC3.64□□□□□ -1.83
FOXS1O43638 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.64□□□□□ -1.83
FOXS1O43638 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.64□□□□□ -1.83
FOXS1O43638 AL158156.1-201ENST00000422509 473 ntBASIC3.64□□□□□ -1.83
FOXS1O43638 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.64□□□□□ -1.83
FOXS1O43638 AL139109.1-201ENST00000455491 297 ntBASIC3.64□□□□□ -1.83
FOXS1O43638 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.64□□□□□ -1.83
FOXS1O43638 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.64□□□□□ -1.83
FOXS1O43638 AC026726.1-201ENST00000512859 601 ntBASIC3.64□□□□□ -1.83
FOXS1O43638 IGKV2-23-201ENST00000518729 323 ntBASIC3.64□□□□□ -1.83
FOXS1O43638 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.64□□□□□ -1.83
FOXS1O43638 AC084851.1-201ENST00000529105 249 ntBASIC3.64□□□□□ -1.83
FOXS1O43638 AC006077.1-201ENST00000604746 343 ntBASIC3.64□□□□□ -1.83
FOXS1O43638 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.64□□□□□ -1.83
FOXS1O43638 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.64□□□□□ -1.83
FOXS1O43638 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
FOXS1O43638 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.64□□□□□ -1.83
FOXS1O43638 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
FOXS1O43638 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
FOXS1O43638 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
FOXS1O43638 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.64□□□□□ -1.83
FOXS1O43638 UBE3AP2-201ENST00000429033 2259 ntBASIC3.64□□□□□ -1.83
FOXS1O43638 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
FOXS1O43638 LINC01109-201ENST00000603837 3081 ntBASIC3.64□□□□□ -1.83
FOXS1O43638 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
FOXS1O43638 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
FOXS1O43638 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.63□□□□□ -1.83
FOXS1O43638 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.63□□□□□ -1.83
FOXS1O43638 SNORD50.1-201ENST00000362987 71 ntBASIC3.63□□□□□ -1.83
FOXS1O43638 RNU6-280P-201ENST00000364145 104 ntBASIC3.63□□□□□ -1.83
FOXS1O43638 Y_RNA.352-201ENST00000365439 102 ntBASIC3.63□□□□□ -1.83
FOXS1O43638 RNU6-827P-201ENST00000365553 106 ntBASIC3.63□□□□□ -1.83
FOXS1O43638 MIR215-201ENST00000384858 110 ntBASIC3.63□□□□□ -1.83
FOXS1O43638 SNORD115-46-201ENST00000390982 71 ntBASIC3.63□□□□□ -1.83
FOXS1O43638 MTCYBP2-201ENST00000407745 171 ntBASIC3.63□□□□□ -1.83
FOXS1O43638 RNU6-1025P-201ENST00000410629 104 ntBASIC3.63□□□□□ -1.83
FOXS1O43638 MTCO1P39-201ENST00000426148 480 ntBASIC3.63□□□□□ -1.83
FOXS1O43638 AL445584.1-201ENST00000431451 330 ntBASIC3.63□□□□□ -1.83
FOXS1O43638 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.63□□□□□ -1.83
FOXS1O43638 HIGD1AP2-201ENST00000446367 280 ntBASIC3.63□□□□□ -1.83
FOXS1O43638 RN7SL542P-201ENST00000467147 294 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms