Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP17L4A6NCW7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.07□□□□□ -1.6
USP17L4A6NCW7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
USP17L4A6NCW7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP17L4A6NCW7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.06□□□□□ -1.6
USP17L4A6NCW7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.06□□□□□ -1.6
USP17L4A6NCW7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.06□□□□□ -1.6
USP17L4A6NCW7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
USP17L4A6NCW7 NOL8P1-201ENST00000508336 3529 ntBASIC5.06□□□□□ -1.6
USP17L4A6NCW7 SNORA71.3-201ENST00000362582 128 ntBASIC5.06□□□□□ -1.6
USP17L4A6NCW7 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.06□□□□□ -1.6
USP17L4A6NCW7 RNU6-968P-201ENST00000384076 107 ntBASIC5.06□□□□□ -1.6
USP17L4A6NCW7 RNU1-44P-201ENST00000384453 163 ntBASIC5.06□□□□□ -1.6
USP17L4A6NCW7 MIR1271-201ENST00000408537 86 ntBASIC5.06□□□□□ -1.6
USP17L4A6NCW7 MIR1911-201ENST00000410783 80 ntBASIC5.06□□□□□ -1.6
USP17L4A6NCW7 RNA5SP31-201ENST00000411144 127 ntBASIC5.06□□□□□ -1.6
USP17L4A6NCW7 PIGPP3-201ENST00000425307 415 ntBASIC5.06□□□□□ -1.6
USP17L4A6NCW7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.06□□□□□ -1.6
USP17L4A6NCW7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
USP17L4A6NCW7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.06□□□□□ -1.6
USP17L4A6NCW7 AL139109.1-201ENST00000455491 297 ntBASIC5.06□□□□□ -1.6
USP17L4A6NCW7 TOMM22P6-201ENST00000465035 409 ntBASIC5.06□□□□□ -1.6
USP17L4A6NCW7 AC078918.1-201ENST00000498515 228 ntBASIC5.06□□□□□ -1.6
USP17L4A6NCW7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.06□□□□□ -1.6
USP17L4A6NCW7 RN7SKP46-201ENST00000515942 234 ntBASIC5.06□□□□□ -1.6
USP17L4A6NCW7 Vault.1-201ENST00000516474 102 ntBASIC5.06□□□□□ -1.6
USP17L4A6NCW7 AC022868.1-201ENST00000517767 391 ntBASIC5.06□□□□□ -1.6
USP17L4A6NCW7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.06□□□□□ -1.6
USP17L4A6NCW7 AC107016.1-201ENST00000550463 337 ntBASIC5.06□□□□□ -1.6
USP17L4A6NCW7 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.06□□□□□ -1.6
USP17L4A6NCW7 AC136932.1-201ENST00000574771 208 ntBASIC5.06□□□□□ -1.6
USP17L4A6NCW7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.06□□□□□ -1.6
USP17L4A6NCW7 MIR6500-201ENST00000622700 86 ntBASIC5.06□□□□□ -1.6
USP17L4A6NCW7 CR392039.5-201ENST00000623201 510 ntBASIC5.06□□□□□ -1.6
USP17L4A6NCW7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.06□□□□□ -1.6
USP17L4A6NCW7 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.06□□□□□ -1.6
USP17L4A6NCW7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
USP17L4A6NCW7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP17L4A6NCW7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
USP17L4A6NCW7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USP17L4A6NCW7 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USP17L4A6NCW7 MAPK10-303ENST00000641324 3959 ntBASIC5.05□□□□□ -1.6
USP17L4A6NCW7 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.05□□□□□ -1.6
USP17L4A6NCW7 SNORA70.4-201ENST00000365509 134 ntBASIC5.05□□□□□ -1.6
USP17L4A6NCW7 Y_RNA.539-201ENST00000384635 107 ntBASIC5.05□□□□□ -1.6
USP17L4A6NCW7 MIR200C-201ENST00000384980 68 ntBASIC5.05□□□□□ -1.6
USP17L4A6NCW7 MIR325-201ENST00000385260 98 ntBASIC5.05□□□□□ -1.6
USP17L4A6NCW7 AC092047.1-201ENST00000424997 240 ntBASIC5.05□□□□□ -1.6
USP17L4A6NCW7 RPL30P5-201ENST00000494923 336 ntBASIC5.05□□□□□ -1.6
USP17L4A6NCW7 RNU4-71P-201ENST00000516258 113 ntBASIC5.05□□□□□ -1.6
USP17L4A6NCW7 SNORA43.2-201ENST00000516652 128 ntBASIC5.05□□□□□ -1.6
USP17L4A6NCW7 RNU6-1183P-201ENST00000517054 60 ntBASIC5.05□□□□□ -1.6
USP17L4A6NCW7 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.05□□□□□ -1.6
USP17L4A6NCW7 AC026470.2-201ENST00000561492 181 ntBASIC5.05□□□□□ -1.6
USP17L4A6NCW7 AC024153.1-201ENST00000603103 365 ntBASIC5.05□□□□□ -1.6
USP17L4A6NCW7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.05□□□□□ -1.6
USP17L4A6NCW7 AC016588.2-201ENST00000632484 3021 ntBASIC5.05□□□□□ -1.6
USP17L4A6NCW7 AP001273.1-201ENST00000624493 3152 ntBASIC5.05□□□□□ -1.6
USP17L4A6NCW7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.05□□□□□ -1.6
USP17L4A6NCW7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
USP17L4A6NCW7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
USP17L4A6NCW7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
USP17L4A6NCW7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.04□□□□□ -1.6
USP17L4A6NCW7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.04□□□□□ -1.6
USP17L4A6NCW7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP17L4A6NCW7 Y_RNA.143-201ENST00000363520 106 ntBASIC5.04□□□□□ -1.6
USP17L4A6NCW7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
USP17L4A6NCW7 RNU6-1197P-201ENST00000391183 107 ntBASIC5.04□□□□□ -1.6
USP17L4A6NCW7 SNORD66.1-201ENST00000391230 76 ntBASIC5.04□□□□□ -1.6
USP17L4A6NCW7 GOT2P5-201ENST00000433995 546 ntBASIC5.04□□□□□ -1.6
USP17L4A6NCW7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.04□□□□□ -1.6
USP17L4A6NCW7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
USP17L4A6NCW7 AL133547.1-201ENST00000448546 220 ntBASIC5.04□□□□□ -1.6
USP17L4A6NCW7 AL500522.2-201ENST00000448562 343 ntBASIC5.04□□□□□ -1.6
USP17L4A6NCW7 AL451050.1-201ENST00000450126 415 ntBASIC5.04□□□□□ -1.6
USP17L4A6NCW7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.04□□□□□ -1.6
USP17L4A6NCW7 UBE2CP3-201ENST00000502715 450 ntBASIC5.04□□□□□ -1.6
USP17L4A6NCW7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.04□□□□□ -1.6
USP17L4A6NCW7 RNU6-1338P-201ENST00000516328 91 ntBASIC5.04□□□□□ -1.6
USP17L4A6NCW7 RNA5SP360-201ENST00000516555 118 ntBASIC5.04□□□□□ -1.6
USP17L4A6NCW7 RNU6-703P-201ENST00000516946 107 ntBASIC5.04□□□□□ -1.6
USP17L4A6NCW7 SNORA81.3-201ENST00000517283 198 ntBASIC5.04□□□□□ -1.6
USP17L4A6NCW7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.04□□□□□ -1.6
USP17L4A6NCW7 AC090281.1-201ENST00000523019 276 ntBASIC5.04□□□□□ -1.6
USP17L4A6NCW7 AC022080.3-201ENST00000544433 482 ntBASIC5.04□□□□□ -1.6
USP17L4A6NCW7 CYCSP39-201ENST00000565821 309 ntBASIC5.04□□□□□ -1.6
USP17L4A6NCW7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.04□□□□□ -1.6
USP17L4A6NCW7 AC010900.2-201ENST00000604508 210 ntBASIC5.04□□□□□ -1.6
USP17L4A6NCW7 AC007390.2-201ENST00000606229 3803 ntBASIC5.04□□□□□ -1.6
USP17L4A6NCW7 BX284668.6-201ENST00000606899 438 ntBASIC5.04□□□□□ -1.6
USP17L4A6NCW7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.04□□□□□ -1.6
USP17L4A6NCW7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP17L4A6NCW7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP17L4A6NCW7 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.03□□□□□ -1.6
USP17L4A6NCW7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP17L4A6NCW7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP17L4A6NCW7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP17L4A6NCW7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP17L4A6NCW7 Y_RNA.54-201ENST00000362766 105 ntBASIC5.03□□□□□ -1.6
USP17L4A6NCW7 RNU6-280P-201ENST00000364145 104 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms