Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 SNORA71.3-201ENST00000362582 128 ntBASIC5.06□□□□□ -1.6
USP17L3A6NCW0 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.06□□□□□ -1.6
USP17L3A6NCW0 RNU6-968P-201ENST00000384076 107 ntBASIC5.06□□□□□ -1.6
USP17L3A6NCW0 RNU1-44P-201ENST00000384453 163 ntBASIC5.06□□□□□ -1.6
USP17L3A6NCW0 MIR1271-201ENST00000408537 86 ntBASIC5.06□□□□□ -1.6
USP17L3A6NCW0 MIR1911-201ENST00000410783 80 ntBASIC5.06□□□□□ -1.6
USP17L3A6NCW0 RNA5SP31-201ENST00000411144 127 ntBASIC5.06□□□□□ -1.6
USP17L3A6NCW0 PIGPP3-201ENST00000425307 415 ntBASIC5.06□□□□□ -1.6
USP17L3A6NCW0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.06□□□□□ -1.6
USP17L3A6NCW0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
USP17L3A6NCW0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.06□□□□□ -1.6
USP17L3A6NCW0 AL139109.1-201ENST00000455491 297 ntBASIC5.06□□□□□ -1.6
USP17L3A6NCW0 TOMM22P6-201ENST00000465035 409 ntBASIC5.06□□□□□ -1.6
USP17L3A6NCW0 AC078918.1-201ENST00000498515 228 ntBASIC5.06□□□□□ -1.6
USP17L3A6NCW0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.06□□□□□ -1.6
USP17L3A6NCW0 RN7SKP46-201ENST00000515942 234 ntBASIC5.06□□□□□ -1.6
USP17L3A6NCW0 Vault.1-201ENST00000516474 102 ntBASIC5.06□□□□□ -1.6
USP17L3A6NCW0 AC022868.1-201ENST00000517767 391 ntBASIC5.06□□□□□ -1.6
USP17L3A6NCW0 AC107016.1-201ENST00000550463 337 ntBASIC5.06□□□□□ -1.6
USP17L3A6NCW0 AC136932.1-201ENST00000574771 208 ntBASIC5.06□□□□□ -1.6
USP17L3A6NCW0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.06□□□□□ -1.6
USP17L3A6NCW0 MIR6500-201ENST00000622700 86 ntBASIC5.06□□□□□ -1.6
USP17L3A6NCW0 CR392039.5-201ENST00000623201 510 ntBASIC5.06□□□□□ -1.6
USP17L3A6NCW0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.06□□□□□ -1.6
USP17L3A6NCW0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.06□□□□□ -1.6
USP17L3A6NCW0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
USP17L3A6NCW0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP17L3A6NCW0 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
USP17L3A6NCW0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USP17L3A6NCW0 MAPK10-303ENST00000641324 3959 ntBASIC5.05□□□□□ -1.6
USP17L3A6NCW0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.05□□□□□ -1.6
USP17L3A6NCW0 SNORA70.4-201ENST00000365509 134 ntBASIC5.05□□□□□ -1.6
USP17L3A6NCW0 Y_RNA.539-201ENST00000384635 107 ntBASIC5.05□□□□□ -1.6
USP17L3A6NCW0 MIR200C-201ENST00000384980 68 ntBASIC5.05□□□□□ -1.6
USP17L3A6NCW0 MIR325-201ENST00000385260 98 ntBASIC5.05□□□□□ -1.6
USP17L3A6NCW0 AC092047.1-201ENST00000424997 240 ntBASIC5.05□□□□□ -1.6
USP17L3A6NCW0 RPL30P5-201ENST00000494923 336 ntBASIC5.05□□□□□ -1.6
USP17L3A6NCW0 RNU4-71P-201ENST00000516258 113 ntBASIC5.05□□□□□ -1.6
USP17L3A6NCW0 SNORA43.2-201ENST00000516652 128 ntBASIC5.05□□□□□ -1.6
USP17L3A6NCW0 RNU6-1183P-201ENST00000517054 60 ntBASIC5.05□□□□□ -1.6
USP17L3A6NCW0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.05□□□□□ -1.6
USP17L3A6NCW0 AC026470.2-201ENST00000561492 181 ntBASIC5.05□□□□□ -1.6
USP17L3A6NCW0 AC024153.1-201ENST00000603103 365 ntBASIC5.05□□□□□ -1.6
USP17L3A6NCW0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.05□□□□□ -1.6
USP17L3A6NCW0 AC016588.2-201ENST00000632484 3021 ntBASIC5.05□□□□□ -1.6
USP17L3A6NCW0 AP001273.1-201ENST00000624493 3152 ntBASIC5.05□□□□□ -1.6
USP17L3A6NCW0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.05□□□□□ -1.6
USP17L3A6NCW0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
USP17L3A6NCW0 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
USP17L3A6NCW0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
USP17L3A6NCW0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.04□□□□□ -1.6
USP17L3A6NCW0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.04□□□□□ -1.6
USP17L3A6NCW0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP17L3A6NCW0 Y_RNA.143-201ENST00000363520 106 ntBASIC5.04□□□□□ -1.6
USP17L3A6NCW0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
USP17L3A6NCW0 RNU6-1197P-201ENST00000391183 107 ntBASIC5.04□□□□□ -1.6
USP17L3A6NCW0 SNORD66.1-201ENST00000391230 76 ntBASIC5.04□□□□□ -1.6
USP17L3A6NCW0 GNG5P5-201ENST00000420444 220 ntBASIC5.04□□□□□ -1.6
USP17L3A6NCW0 GOT2P5-201ENST00000433995 546 ntBASIC5.04□□□□□ -1.6
USP17L3A6NCW0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.04□□□□□ -1.6
USP17L3A6NCW0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
USP17L3A6NCW0 AL133547.1-201ENST00000448546 220 ntBASIC5.04□□□□□ -1.6
USP17L3A6NCW0 AL500522.2-201ENST00000448562 343 ntBASIC5.04□□□□□ -1.6
USP17L3A6NCW0 AL451050.1-201ENST00000450126 415 ntBASIC5.04□□□□□ -1.6
USP17L3A6NCW0 UBE2CP3-201ENST00000502715 450 ntBASIC5.04□□□□□ -1.6
USP17L3A6NCW0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.04□□□□□ -1.6
USP17L3A6NCW0 RNU6-1338P-201ENST00000516328 91 ntBASIC5.04□□□□□ -1.6
USP17L3A6NCW0 RNA5SP360-201ENST00000516555 118 ntBASIC5.04□□□□□ -1.6
USP17L3A6NCW0 RNU6-703P-201ENST00000516946 107 ntBASIC5.04□□□□□ -1.6
USP17L3A6NCW0 SNORA81.3-201ENST00000517283 198 ntBASIC5.04□□□□□ -1.6
USP17L3A6NCW0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.04□□□□□ -1.6
USP17L3A6NCW0 AC090281.1-201ENST00000523019 276 ntBASIC5.04□□□□□ -1.6
USP17L3A6NCW0 AC022080.3-201ENST00000544433 482 ntBASIC5.04□□□□□ -1.6
USP17L3A6NCW0 CYCSP39-201ENST00000565821 309 ntBASIC5.04□□□□□ -1.6
USP17L3A6NCW0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.04□□□□□ -1.6
USP17L3A6NCW0 AC010900.2-201ENST00000604508 210 ntBASIC5.04□□□□□ -1.6
USP17L3A6NCW0 AC007390.2-201ENST00000606229 3803 ntBASIC5.04□□□□□ -1.6
USP17L3A6NCW0 BX284668.6-201ENST00000606899 438 ntBASIC5.04□□□□□ -1.6
USP17L3A6NCW0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.04□□□□□ -1.6
USP17L3A6NCW0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP17L3A6NCW0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP17L3A6NCW0 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.03□□□□□ -1.6
USP17L3A6NCW0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP17L3A6NCW0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP17L3A6NCW0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP17L3A6NCW0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP17L3A6NCW0 Y_RNA.54-201ENST00000362766 105 ntBASIC5.03□□□□□ -1.6
USP17L3A6NCW0 RNU6-280P-201ENST00000364145 104 ntBASIC5.03□□□□□ -1.6
USP17L3A6NCW0 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.03□□□□□ -1.6
USP17L3A6NCW0 Y_RNA.555-201ENST00000384673 110 ntBASIC5.03□□□□□ -1.6
USP17L3A6NCW0 RNU6-1245P-201ENST00000411130 106 ntBASIC5.03□□□□□ -1.6
USP17L3A6NCW0 EIF1AXP1-201ENST00000419267 435 ntBASIC5.03□□□□□ -1.6
USP17L3A6NCW0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC5.03□□□□□ -1.6
USP17L3A6NCW0 AP000907.1-201ENST00000428428 510 ntBASIC5.03□□□□□ -1.6
USP17L3A6NCW0 AL512844.2-201ENST00000433990 593 ntBASIC5.03□□□□□ -1.6
USP17L3A6NCW0 Z82188.1-201ENST00000436709 154 ntBASIC5.03□□□□□ -1.6
USP17L3A6NCW0 AL353705.4-201ENST00000449661 238 ntBASIC5.03□□□□□ -1.6
USP17L3A6NCW0 MTATP6P7-201ENST00000453315 681 ntBASIC5.03□□□□□ -1.6
USP17L3A6NCW0 U8.22-201ENST00000459141 133 ntBASIC5.03□□□□□ -1.6
USP17L3A6NCW0 RN7SKP272-201ENST00000516988 232 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 216.9 ms