Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RN7SKP61-201ENST00000410642 295 ntBASIC5.17□□□□□ -1.58
PCDHB3Q9Y5E6 AL160275.2-201ENST00000412010 394 ntBASIC5.17□□□□□ -1.58
PCDHB3Q9Y5E6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHB3Q9Y5E6 HMGB3P8-201ENST00000449709 577 ntBASIC5.17□□□□□ -1.58
PCDHB3Q9Y5E6 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHB3Q9Y5E6 AURKAPS2-201ENST00000454983 333 ntBASIC5.17□□□□□ -1.58
PCDHB3Q9Y5E6 UQCRHP4-201ENST00000471686 272 ntBASIC5.17□□□□□ -1.58
PCDHB3Q9Y5E6 AC146944.2-203ENST00000502493 354 ntBASIC5.17□□□□□ -1.58
PCDHB3Q9Y5E6 AC139495.1-202ENST00000513164 354 ntBASIC5.17□□□□□ -1.58
PCDHB3Q9Y5E6 Y_RNA.677-201ENST00000516401 85 ntBASIC5.17□□□□□ -1.58
PCDHB3Q9Y5E6 RNU6-1183P-201ENST00000517054 60 ntBASIC5.17□□□□□ -1.58
PCDHB3Q9Y5E6 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHB3Q9Y5E6 AC020895.1-201ENST00000595362 272 ntBASIC5.17□□□□□ -1.58
PCDHB3Q9Y5E6 AC019159.1-201ENST00000605094 187 ntBASIC5.17□□□□□ -1.58
PCDHB3Q9Y5E6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHB3Q9Y5E6 SCARNA15-201ENST00000607520 4325 ntBASIC5.17□□□□□ -1.58
PCDHB3Q9Y5E6 AC104623.2-202ENST00000623477 4002 ntBASIC5.17□□□□□ -1.58
PCDHB3Q9Y5E6 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB3Q9Y5E6 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 RN7SKP103-201ENST00000363848 320 ntBASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 RNU6-1141P-201ENST00000364520 107 ntBASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 MIR585-201ENST00000384887 94 ntBASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 AL606845.1-201ENST00000404881 255 ntBASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 RPL27AP8-201ENST00000424277 446 ntBASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 SNRPEP9-201ENST00000436794 238 ntBASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 RPS23P7-201ENST00000466210 444 ntBASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 RPL23AP14-201ENST00000468281 468 ntBASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 RPL23AP70-201ENST00000483361 460 ntBASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 RN7SL808P-201ENST00000496066 299 ntBASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 RN7SKP66-201ENST00000516681 231 ntBASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 RNU6-537P-201ENST00000517277 103 ntBASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 AC021231.3-201ENST00000558497 370 ntBASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 LINC00933-203ENST00000559812 219 ntBASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 MIR3691-201ENST00000578066 90 ntBASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 AC109583.2-201ENST00000617367 129 ntBASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 AP002799.1-201ENST00000623552 423 ntBASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 AC012640.5-201ENST00000623897 319 ntBASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
PCDHB3Q9Y5E6 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHB3Q9Y5E6 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHB3Q9Y5E6 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHB3Q9Y5E6 CENPCP1-201ENST00000533085 2578 ntBASIC5.15□□□□□ -1.58
PCDHB3Q9Y5E6 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
PCDHB3Q9Y5E6 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.15□□□□□ -1.58
PCDHB3Q9Y5E6 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHB3Q9Y5E6 MUC2-202ENST00000613187 4845 ntBASIC5.15□□□□□ -1.58
PCDHB3Q9Y5E6 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHB3Q9Y5E6 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.15□□□□□ -1.58
PCDHB3Q9Y5E6 RNU6-727P-201ENST00000363592 107 ntBASIC5.15□□□□□ -1.59
PCDHB3Q9Y5E6 RNU6-454P-201ENST00000364292 107 ntBASIC5.15□□□□□ -1.59
PCDHB3Q9Y5E6 RNU1-43P-201ENST00000365052 165 ntBASIC5.15□□□□□ -1.59
PCDHB3Q9Y5E6 RNU6-728P-201ENST00000365375 104 ntBASIC5.15□□□□□ -1.59
PCDHB3Q9Y5E6 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHB3Q9Y5E6 MIR544A-201ENST00000384855 91 ntBASIC5.15□□□□□ -1.59
PCDHB3Q9Y5E6 MIR549A-201ENST00000385268 96 ntBASIC5.15□□□□□ -1.59
PCDHB3Q9Y5E6 RNU6-1228P-201ENST00000391014 107 ntBASIC5.15□□□□□ -1.59
PCDHB3Q9Y5E6 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.15□□□□□ -1.59
PCDHB3Q9Y5E6 Y_RNA.630-201ENST00000411370 108 ntBASIC5.15□□□□□ -1.59
PCDHB3Q9Y5E6 Mico1.1-201ENST00000611698 204 ntBASIC5.15□□□□□ -1.59
PCDHB3Q9Y5E6 AC244107.2-201ENST00000611773 76 ntBASIC5.15□□□□□ -1.59
PCDHB3Q9Y5E6 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDHB3Q9Y5E6 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDHB3Q9Y5E6 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHB3Q9Y5E6 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDHB3Q9Y5E6 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.15□□□□□ -1.59
PCDHB3Q9Y5E6 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHB3Q9Y5E6 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHB3Q9Y5E6 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 U3.2-201ENST00000362981 210 ntBASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 Y_RNA.229-201ENST00000364347 113 ntBASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 RNU6-245P-201ENST00000384020 107 ntBASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 SNORA16A-201ENST00000384342 137 ntBASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 AC093162.1-201ENST00000419682 124 ntBASIC5.14□□□□□ -1.59
PCDHB3Q9Y5E6 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms