Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC087045.1-201ENST00000605856 382 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 AC010133.1-201ENST00000615809 842 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 AL121890.5-201ENST00000620848 304 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 ICE2P2-201ENST00000483823 2787 ntBASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
COMMD3Q9UBI1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 RNU1-58P-201ENST00000362413 163 ntBASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 RNU6-492P-201ENST00000363035 104 ntBASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 RNU6-271P-201ENST00000363858 105 ntBASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 RNU6-637P-201ENST00000384050 107 ntBASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 RPS26P55-201ENST00000471178 356 ntBASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 AC011005.2-201ENST00000487324 359 ntBASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 MTCYBP16-201ENST00000509187 1129 ntBASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 RNU6-927P-201ENST00000516199 100 ntBASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 AP003122.4-201ENST00000530980 758 ntBASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 BNIP3P27-201ENST00000599991 412 ntBASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 AC097468.3-201ENST00000607956 456 ntBASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 AL353770.2-201ENST00000620024 78 ntBASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 AL590396.4-201ENST00000636779 956 ntBASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.81□□□□□ -2.28
COMMD3Q9UBI1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 RNU4-51P-201ENST00000364206 140 ntBASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 RNU6-1164P-201ENST00000364428 107 ntBASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 RNU4-62P-201ENST00000410125 130 ntBASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 RNU6-775P-201ENST00000459318 96 ntBASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 RNU7-140P-201ENST00000459546 60 ntBASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 MEMO1P3-201ENST00000459811 302 ntBASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 AC108210.2-201ENST00000503681 201 ntBASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 RAB11AP2-201ENST00000545905 639 ntBASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 AC012414.6-201ENST00000568241 401 ntBASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 AC009977.1-201ENST00000586015 570 ntBASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 BBIP1P1-201ENST00000602999 279 ntBASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 AL022345.1-201ENST00000607292 135 ntBASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 AL157834.3-201ENST00000615543 103 ntBASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
COMMD3Q9UBI1 RNU6-1066P-201ENST00000363573 105 ntBASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 RNU6-611P-201ENST00000384276 104 ntBASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 RNU6-658P-201ENST00000384606 106 ntBASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 AC092634.2-201ENST00000428146 1010 ntBASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 AC010153.1-201ENST00000432862 727 ntBASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 AL135790.2-201ENST00000437701 267 ntBASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 RPS15AP9-201ENST00000439856 381 ntBASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 RPL39P6-201ENST00000448289 150 ntBASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 RNU7-95P-201ENST00000459222 64 ntBASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 AC087343.1-201ENST00000477341 475 ntBASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 AC087441.2-201ENST00000529141 262 ntBASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 RPS3AP4-201ENST00000555161 764 ntBASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 AC002400.1-201ENST00000569310 726 ntBASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 MIR4637-201ENST00000582405 84 ntBASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 NIFKP6-201ENST00000598115 845 ntBASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 AL355802.3-201ENST00000607571 545 ntBASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 AC084824.4-201ENST00000620106 731 ntBASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.79□□□□□ -2.28
COMMD3Q9UBI1 OR5T3-201ENST00000303059 1023 ntBASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 Y_RNA.234-201ENST00000364409 97 ntBASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 RNU6-359P-201ENST00000365466 108 ntBASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 RNU6-1032P-201ENST00000384100 107 ntBASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 RNU6-1222P-201ENST00000384615 107 ntBASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 RNA5SP213-201ENST00000391031 106 ntBASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 SNRPEP10-201ENST00000420249 274 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms