Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
ATL3Q6DD88 AC009159.2-201ENST00000617603 606 ntBASIC2.26□□□□□ -2.05
ATL3Q6DD88 AC006338.1-201ENST00000618453 749 ntBASIC2.26□□□□□ -2.05
ATL3Q6DD88 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.26□□□□□ -2.05
ATL3Q6DD88 AC009878.1-201ENST00000621819 340 ntBASIC2.26□□□□□ -2.05
ATL3Q6DD88 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.26□□□□□ -2.05
ATL3Q6DD88 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.26□□□□□ -2.05
ATL3Q6DD88 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.25□□□□□ -2.05
ATL3Q6DD88 SNORD23.1-201ENST00000408212 104 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 U6atac.2-201ENST00000408644 118 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 U3.40-201ENST00000408706 208 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 NPM1P11-201ENST00000417106 855 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 MTND4P20-201ENST00000424125 869 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 AL353729.1-201ENST00000425044 720 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 RPL36AP53-201ENST00000432891 316 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.25□□□□□ -2.05
ATL3Q6DD88 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.25□□□□□ -2.05
ATL3Q6DD88 RNU7-125P-201ENST00000458760 62 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 MTND1P22-201ENST00000510572 951 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 MRPS33P3-201ENST00000513456 322 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 RNU6-1092P-201ENST00000516955 87 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 Y_RNA.717-201ENST00000517106 92 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 AC006199.1-201ENST00000548728 219 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.25□□□□□ -2.05
ATL3Q6DD88 AC104984.5-201ENST00000586878 94 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 AC104763.2-201ENST00000604179 382 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 AL022161.1-201ENST00000604390 213 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 AL021997.1-201ENST00000605757 193 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 RNU6-87P-201ENST00000607561 108 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 AC069294.1-201ENST00000608397 350 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.25□□□□□ -2.05
ATL3Q6DD88 AC009090.3-201ENST00000616553 565 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 AL031601.2-202ENST00000622650 282 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 MTND5P42-201ENST00000637720 498 ntBASIC2.25□□□□□ -2.05
ATL3Q6DD88 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.25□□□□□ -2.05
ATL3Q6DD88 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
ATL3Q6DD88 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
ATL3Q6DD88 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 SNORA3A-201ENST00000364113 130 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 RNU5E-5P-201ENST00000365379 116 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 XGY1-201ENST00000381172 446 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 Z98749.2-208ENST00000381646 500 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 AL031577.2-201ENST00000404133 280 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 RNA5SP489-201ENST00000410986 109 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.24□□□□□ -2.05
ATL3Q6DD88 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.24□□□□□ -2.05
ATL3Q6DD88 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.24□□□□□ -2.05
ATL3Q6DD88 AC093106.2-201ENST00000428212 385 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.24□□□□□ -2.05
ATL3Q6DD88 AL161651.1-201ENST00000440882 223 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 BRK1P2-201ENST00000442875 223 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.24□□□□□ -2.05
ATL3Q6DD88 PSPHP1-201ENST00000450062 261 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 AL441985.1-201ENST00000457727 251 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.24□□□□□ -2.05
ATL3Q6DD88 AP000797.1-201ENST00000478870 387 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 MTND1P3-201ENST00000484956 952 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 RPS27P21-201ENST00000486977 252 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.24□□□□□ -2.05
ATL3Q6DD88 RNU2-10P-201ENST00000516375 211 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 AC009902.1-201ENST00000519351 183 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 AC022878.1-201ENST00000530684 149 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.24□□□□□ -2.05
ATL3Q6DD88 CYCSP26-201ENST00000534107 320 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 LRRC34P1-201ENST00000542742 915 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.24□□□□□ -2.05
ATL3Q6DD88 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.24□□□□□ -2.05
ATL3Q6DD88 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.24□□□□□ -2.05
ATL3Q6DD88 AC012435.1-202ENST00000568772 240 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 ROCK1P1-201ENST00000573767 549 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 MIR3199-1-201ENST00000582434 88 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 AC174048.1-201ENST00000603389 144 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.24□□□□□ -2.05
ATL3Q6DD88 YWHAEP7-203ENST00000622054 312 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 AC099654.13-201ENST00000639774 207 ntBASIC2.24□□□□□ -2.05
ATL3Q6DD88 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
ATL3Q6DD88 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.23□□□□□ -2.05
ATL3Q6DD88 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
ATL3Q6DD88 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
ATL3Q6DD88 RNU6-486P-201ENST00000363116 107 ntBASIC2.23□□□□□ -2.05
ATL3Q6DD88 RNU6-288P-201ENST00000363690 104 ntBASIC2.23□□□□□ -2.05
ATL3Q6DD88 RNU6-553P-201ENST00000364047 96 ntBASIC2.23□□□□□ -2.05
ATL3Q6DD88 SNORA4.3-201ENST00000365564 137 ntBASIC2.23□□□□□ -2.05
ATL3Q6DD88 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
ATL3Q6DD88 AL023284.1-201ENST00000403956 276 ntBASIC2.23□□□□□ -2.05
ATL3Q6DD88 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.23□□□□□ -2.05
ATL3Q6DD88 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.23□□□□□ -2.05
ATL3Q6DD88 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
ATL3Q6DD88 AL139413.1-201ENST00000421309 217 ntBASIC2.23□□□□□ -2.05
ATL3Q6DD88 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.23□□□□□ -2.05
ATL3Q6DD88 AL356583.2-201ENST00000426536 280 ntBASIC2.23□□□□□ -2.05
ATL3Q6DD88 SRIP2-201ENST00000428470 166 ntBASIC2.23□□□□□ -2.05
ATL3Q6DD88 AL592045.1-201ENST00000429867 352 ntBASIC2.23□□□□□ -2.05
ATL3Q6DD88 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.23□□□□□ -2.05
ATL3Q6DD88 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.23□□□□□ -2.05
ATL3Q6DD88 SSXP1-201ENST00000453640 473 ntBASIC2.23□□□□□ -2.05
ATL3Q6DD88 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.23□□□□□ -2.05
ATL3Q6DD88 RNA5SP112-201ENST00000515937 99 ntBASIC2.23□□□□□ -2.05
ATL3Q6DD88 SNORA31.6-201ENST00000516241 130 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms