Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 ASNSP1-201ENST00000518311 1939 ntBASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 AC134026.1-201ENST00000623249 2239 ntBASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.19□□□□□ -1.58
CTC1Q2NKJ3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 AL031595.2-201ENST00000624215 19071 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 snoU2_19.4-201ENST00000364329 80 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 RNA5SP173-201ENST00000364857 136 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 RNU6-407P-201ENST00000365280 104 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 RNU6-395P-201ENST00000365662 106 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 RPEP3-201ENST00000425462 676 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 AC009238.2-201ENST00000431026 355 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 AL590399.6-201ENST00000446396 307 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 Y_RNA.637-201ENST00000459424 114 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 AC146944.2-203ENST00000502493 354 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 BTF3L4P4-201ENST00000506381 449 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 AC139495.1-202ENST00000513164 354 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 RNA5SP165-201ENST00000517142 115 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 AC008694.2-201ENST00000517591 306 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 AC021269.2-201ENST00000532318 330 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 AC109810.1-201ENST00000534066 224 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 AL670379.3-201ENST00000605040 251 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 RMST_6.1-201ENST00000611980 203 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 uc_338.28-201ENST00000612082 187 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CTC1Q2NKJ3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 ZNF702P-202ENST00000434269 1966 ntBASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 RNU6-103P-201ENST00000363686 107 ntBASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 MIR135A2-201ENST00000384854 100 ntBASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 RNA5SP397-201ENST00000391323 118 ntBASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 BPY2DP-201ENST00000422208 265 ntBASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 RPL23AP49-201ENST00000492925 468 ntBASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 AL161713.1-201ENST00000555538 145 ntBASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 MIR1273C-201ENST00000578669 77 ntBASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 SMG1P4-204ENST00000523028 4131 ntBASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.17□□□□□ -1.58
CTC1Q2NKJ3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 SCARNA15-201ENST00000607520 4325 ntBASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 AC093535.2-201ENST00000624769 2326 ntBASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 RNU6-1155P-201ENST00000363554 107 ntBASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 RNU4-10P-201ENST00000364383 140 ntBASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 RNU6-541P-201ENST00000384709 110 ntBASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 MIR153-2-201ENST00000385225 87 ntBASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 BTF3L4P2-201ENST00000392798 346 ntBASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 U3.32-201ENST00000408116 212 ntBASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 RPL36AP10-201ENST00000421785 322 ntBASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 RPL21P129-201ENST00000491732 478 ntBASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 RNU6-65P-201ENST00000516332 98 ntBASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms