Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 NIFKP6-201ENST00000598115 845 ntBASIC0.82□□□□□ -2.28
HIST1H1AQ02539 BNIP3P27-201ENST00000599991 412 ntBASIC0.82□□□□□ -2.28
HIST1H1AQ02539 AC123912.5-201ENST00000605470 343 ntBASIC0.82□□□□□ -2.28
HIST1H1AQ02539 AL118556.2-201ENST00000614375 824 ntBASIC0.82□□□□□ -2.28
HIST1H1AQ02539 AL163051.2-201ENST00000618976 735 ntBASIC0.82□□□□□ -2.28
HIST1H1AQ02539 AC012676.2-201ENST00000619258 186 ntBASIC0.82□□□□□ -2.28
HIST1H1AQ02539 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.82□□□□□ -2.28
HIST1H1AQ02539 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.82□□□□□ -2.28
HIST1H1AQ02539 MFSD8-213ENST00000641134 1327 ntBASIC0.82□□□□□ -2.28
HIST1H1AQ02539 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.82□□□□□ -2.28
HIST1H1AQ02539 AL391987.6-201ENST00000305671 199 ntBASIC0.81□□□□□ -2.28
HIST1H1AQ02539 RNU6-1005P-201ENST00000384519 107 ntBASIC0.81□□□□□ -2.28
HIST1H1AQ02539 AC004965.1-201ENST00000413033 213 ntBASIC0.81□□□□□ -2.28
HIST1H1AQ02539 BTF3P4-201ENST00000418852 495 ntBASIC0.81□□□□□ -2.28
HIST1H1AQ02539 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.81□□□□□ -2.28
HIST1H1AQ02539 AL135790.2-201ENST00000437701 267 ntBASIC0.81□□□□□ -2.28
HIST1H1AQ02539 RPS15AP9-201ENST00000439856 381 ntBASIC0.81□□□□□ -2.28
HIST1H1AQ02539 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.81□□□□□ -2.28
HIST1H1AQ02539 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.81□□□□□ -2.28
HIST1H1AQ02539 RPL39P28-201ENST00000465655 155 ntBASIC0.81□□□□□ -2.28
HIST1H1AQ02539 AP001025.1-201ENST00000486139 332 ntBASIC0.81□□□□□ -2.28
HIST1H1AQ02539 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.81□□□□□ -2.28
HIST1H1AQ02539 AC118282.2-201ENST00000508739 374 ntBASIC0.81□□□□□ -2.28
HIST1H1AQ02539 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.81□□□□□ -2.28
HIST1H1AQ02539 AP000763.2-201ENST00000540641 163 ntBASIC0.81□□□□□ -2.28
HIST1H1AQ02539 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
HIST1H1AQ02539 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.81□□□□□ -2.28
HIST1H1AQ02539 MIR4524B-201ENST00000581569 115 ntBASIC0.81□□□□□ -2.28
HIST1H1AQ02539 RNU6-91P-201ENST00000607774 107 ntBASIC0.81□□□□□ -2.28
HIST1H1AQ02539 AC010133.1-201ENST00000615809 842 ntBASIC0.81□□□□□ -2.28
HIST1H1AQ02539 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.81□□□□□ -2.28
HIST1H1AQ02539 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.81□□□□□ -2.28
HIST1H1AQ02539 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HIST1H1AQ02539 RNU6-1164P-201ENST00000364428 107 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
HIST1H1AQ02539 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.8□□□□□ -2.28
HIST1H1AQ02539 RNU1-39P-201ENST00000383897 165 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 RNU2-48P-201ENST00000410694 191 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 PIGPP2-201ENST00000411569 458 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 RPS12P24-201ENST00000412619 387 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 SRIP3-201ENST00000413200 219 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 AP1B1P2-201ENST00000416196 106 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 NCOR1P3-201ENST00000420479 303 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 AC139712.2-201ENST00000424302 339 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 RPS27P16-201ENST00000425758 201 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 COX6CP18-201ENST00000448769 222 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 HMGN2P18-201ENST00000450680 270 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 CECR9-201ENST00000453421 199 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.8□□□□□ -2.28
HIST1H1AQ02539 SNRPFP4-201ENST00000456366 242 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 PRELID3BP1-201ENST00000457142 540 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.8□□□□□ -2.28
HIST1H1AQ02539 AC108729.1-201ENST00000487812 947 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 PTP4A1P4-201ENST00000512479 322 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 RNU6-703P-201ENST00000516946 107 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 RNU6-586P-201ENST00000517265 104 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.8□□□□□ -2.28
HIST1H1AQ02539 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.8□□□□□ -2.28
HIST1H1AQ02539 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.8□□□□□ -2.28
HIST1H1AQ02539 AC090115.3-201ENST00000553218 849 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.8□□□□□ -2.28
HIST1H1AQ02539 MIR6715A-201ENST00000615929 79 ntBASIC0.8□□□□□ -2.28
HIST1H1AQ02539 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.79□□□□□ -2.28
HIST1H1AQ02539 MIR302D-201ENST00000362275 68 ntBASIC0.79□□□□□ -2.28
HIST1H1AQ02539 RNU6-839P-201ENST00000363347 108 ntBASIC0.79□□□□□ -2.28
HIST1H1AQ02539 SNORA29-201ENST00000384183 140 ntBASIC0.79□□□□□ -2.28
HIST1H1AQ02539 RNU6-658P-201ENST00000384606 106 ntBASIC0.79□□□□□ -2.28
HIST1H1AQ02539 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.79□□□□□ -2.28
HIST1H1AQ02539 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.79□□□□□ -2.28
HIST1H1AQ02539 MTCO3P1-205ENST00000422088 832 ntBASIC0.79□□□□□ -2.28
HIST1H1AQ02539 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.79□□□□□ -2.28
HIST1H1AQ02539 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.79□□□□□ -2.28
HIST1H1AQ02539 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.79□□□□□ -2.28
HIST1H1AQ02539 AC087343.1-201ENST00000477341 475 ntBASIC0.79□□□□□ -2.28
HIST1H1AQ02539 RPS23P4-201ENST00000487908 423 ntBASIC0.79□□□□□ -2.28
HIST1H1AQ02539 AL133373.1-201ENST00000497098 94 ntBASIC0.79□□□□□ -2.28
HIST1H1AQ02539 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.79□□□□□ -2.28
HIST1H1AQ02539 UBL5P1-201ENST00000507979 193 ntBASIC0.79□□□□□ -2.28
HIST1H1AQ02539 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.79□□□□□ -2.28
HIST1H1AQ02539 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.79□□□□□ -2.28
HIST1H1AQ02539 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.79□□□□□ -2.28
HIST1H1AQ02539 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.79□□□□□ -2.28
HIST1H1AQ02539 AC090615.1-201ENST00000577519 154 ntBASIC0.79□□□□□ -2.28
HIST1H1AQ02539 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.79□□□□□ -2.28
HIST1H1AQ02539 WISP1-OT1-201ENST00000602893 642 ntBASIC0.79□□□□□ -2.28
HIST1H1AQ02539 AC091946.2-201ENST00000606105 291 ntBASIC0.79□□□□□ -2.28
HIST1H1AQ02539 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
HIST1H1AQ02539 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
HIST1H1AQ02539 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
HIST1H1AQ02539 SNORD33-201ENST00000362761 85 ntBASIC0.78□□□□□ -2.28
HIST1H1AQ02539 RNU1-22P-201ENST00000363334 158 ntBASIC0.78□□□□□ -2.28
HIST1H1AQ02539 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
HIST1H1AQ02539 RNU6-482P-201ENST00000391068 107 ntBASIC0.78□□□□□ -2.28
HIST1H1AQ02539 MIR1267-201ENST00000408723 78 ntBASIC0.78□□□□□ -2.28
HIST1H1AQ02539 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.78□□□□□ -2.28
HIST1H1AQ02539 GDI2P2-201ENST00000445131 608 ntBASIC0.78□□□□□ -2.28
HIST1H1AQ02539 AC092001.1-201ENST00000453012 261 ntBASIC0.78□□□□□ -2.28
HIST1H1AQ02539 AC026410.2-201ENST00000460281 156 ntBASIC0.78□□□□□ -2.28
HIST1H1AQ02539 AC011005.2-201ENST00000487324 359 ntBASIC0.78□□□□□ -2.28
HIST1H1AQ02539 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms