Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
NUBP1P53384 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUBP1P53384 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NUBP1P53384 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NUBP1P53384 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUBP1P53384 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NUBP1P53384 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUBP1P53384 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUBP1P53384 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NUBP1P53384 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUBP1P53384 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUBP1P53384 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUBP1P53384 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUBP1P53384 RNU6-50P-201ENST00000362356 103 ntBASIC5.74□□□□□ -1.49
NUBP1P53384 RNU6-1210P-201ENST00000363775 107 ntBASIC5.74□□□□□ -1.49
NUBP1P53384 RNA5SP335-201ENST00000363817 110 ntBASIC5.74□□□□□ -1.49
NUBP1P53384 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NUBP1P53384 RNA5SP20-201ENST00000515976 84 ntBASIC5.74□□□□□ -1.49
NUBP1P53384 SNORD19.2-201ENST00000516978 73 ntBASIC5.74□□□□□ -1.49
NUBP1P53384 AC107934.2-201ENST00000518653 310 ntBASIC5.74□□□□□ -1.49
NUBP1P53384 IGLV3-30-201ENST00000524362 298 ntBASIC5.74□□□□□ -1.49
NUBP1P53384 TXNP4-201ENST00000575018 310 ntBASIC5.74□□□□□ -1.49
NUBP1P53384 RNU4ATAC-201ENST00000580972 127 ntBASIC5.74□□□□□ -1.49
NUBP1P53384 AC011447.4-201ENST00000587562 111 ntBASIC5.74□□□□□ -1.49
NUBP1P53384 AC012616.1-201ENST00000600294 197 ntBASIC5.74□□□□□ -1.49
NUBP1P53384 AL137067.1-201ENST00000615933 120 ntBASIC5.74□□□□□ -1.49
NUBP1P53384 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
NUBP1P53384 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NUBP1P53384 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUBP1P53384 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NUBP1P53384 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.74□□□□□ -1.49
NUBP1P53384 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUBP1P53384 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUBP1P53384 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC5.73□□□□□ -1.49
NUBP1P53384 ANKRD20A9P-201ENST00000457997 2978 ntBASIC5.73□□□□□ -1.49
NUBP1P53384 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.73□□□□□ -1.49
NUBP1P53384 OR56B2P-202ENST00000641377 2453 ntBASIC5.73□□□□□ -1.49
NUBP1P53384 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUBP1P53384 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUBP1P53384 AC125257.1-201ENST00000560400 2930 ntBASIC5.73□□□□□ -1.49
NUBP1P53384 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NUBP1P53384 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.73□□□□□ -1.49
NUBP1P53384 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
NUBP1P53384 RNY4P6-201ENST00000363667 96 ntBASIC5.73□□□□□ -1.49
NUBP1P53384 Y_RNA.203-201ENST00000364106 102 ntBASIC5.73□□□□□ -1.49
NUBP1P53384 RNA5SP87-201ENST00000384155 118 ntBASIC5.73□□□□□ -1.49
NUBP1P53384 RNA5SP339-201ENST00000390987 122 ntBASIC5.73□□□□□ -1.49
NUBP1P53384 RNA5SP487-201ENST00000410186 122 ntBASIC5.73□□□□□ -1.49
NUBP1P53384 AC009237.10-201ENST00000414112 510 ntBASIC5.73□□□□□ -1.49
NUBP1P53384 GNG5P5-201ENST00000420444 220 ntBASIC5.73□□□□□ -1.49
NUBP1P53384 HMGN2P9-201ENST00000476875 229 ntBASIC5.73□□□□□ -1.49
NUBP1P53384 AP003730.1-201ENST00000524605 285 ntBASIC5.73□□□□□ -1.49
NUBP1P53384 AC073916.1-201ENST00000545095 130 ntBASIC5.73□□□□□ -1.49
NUBP1P53384 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC5.73□□□□□ -1.49
NUBP1P53384 MIR3189-201ENST00000578735 73 ntBASIC5.73□□□□□ -1.49
NUBP1P53384 AC012493.2-201ENST00000595083 291 ntBASIC5.73□□□□□ -1.49
NUBP1P53384 AC000068.2-201ENST00000608816 460 ntBASIC5.73□□□□□ -1.49
NUBP1P53384 5S_rRNA.13-201ENST00000622298 123 ntBASIC5.73□□□□□ -1.49
NUBP1P53384 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
NUBP1P53384 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.73□□□□□ -1.49
NUBP1P53384 ADAM5-202ENST00000399789 1942 ntBASIC5.73□□□□□ -1.49
NUBP1P53384 AP001541.1-201ENST00000623322 1904 ntBASIC5.73□□□□□ -1.49
NUBP1P53384 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.73□□□□□ -1.49
NUBP1P53384 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
NUBP1P53384 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUBP1P53384 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
NUBP1P53384 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.73□□□□□ -1.49
NUBP1P53384 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.73□□□□□ -1.49
NUBP1P53384 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NUBP1P53384 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUBP1P53384 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUBP1P53384 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NUBP1P53384 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUBP1P53384 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUBP1P53384 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUBP1P53384 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
NUBP1P53384 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.72□□□□□ -1.49
NUBP1P53384 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUBP1P53384 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUBP1P53384 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUBP1P53384 RNU6-655P-201ENST00000362858 107 ntBASIC5.72□□□□□ -1.49
NUBP1P53384 RNVU1-6-201ENST00000364688 164 ntBASIC5.72□□□□□ -1.49
NUBP1P53384 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.72□□□□□ -1.49
NUBP1P53384 AC002075.2-201ENST00000425207 252 ntBASIC5.72□□□□□ -1.49
NUBP1P53384 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC5.72□□□□□ -1.49
NUBP1P53384 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.72□□□□□ -1.49
NUBP1P53384 AC080013.2-201ENST00000460866 323 ntBASIC5.72□□□□□ -1.49
NUBP1P53384 OR9P1P-201ENST00000496431 281 ntBASIC5.72□□□□□ -1.49
NUBP1P53384 ATP5EP1-201ENST00000510257 156 ntBASIC5.72□□□□□ -1.49
NUBP1P53384 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.72□□□□□ -1.49
NUBP1P53384 AC069200.1-201ENST00000609511 323 ntBASIC5.72□□□□□ -1.49
NUBP1P53384 AL035470.1-201ENST00000622571 220 ntBASIC5.72□□□□□ -1.49
NUBP1P53384 AC005086.4-201ENST00000623065 213 ntBASIC5.72□□□□□ -1.49
NUBP1P53384 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUBP1P53384 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.72□□□□□ -1.49
NUBP1P53384 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUBP1P53384 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUBP1P53384 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.72□□□□□ -1.49
NUBP1P53384 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
NUBP1P53384 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms