Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.64□□□□□ -1.67
PRPF40AO75400 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF40AO75400 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF40AO75400 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.64□□□□□ -1.67
PRPF40AO75400 RNU6-428P-201ENST00000362942 107 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 RNU1-18P-201ENST00000363062 164 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 RNA5SP366-201ENST00000365454 123 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 RNU6-72P-201ENST00000384285 79 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 Y_RNA.533-201ENST00000384596 114 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 MIR3074-201ENST00000384885 81 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 MIR1302-3-201ENST00000408128 138 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 MIR548F4-201ENST00000408515 105 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 RNU6-1156P-201ENST00000410365 100 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 YPEL5P1-201ENST00000419731 367 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 MTND3P9-201ENST00000429526 346 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 MTCYBP9-201ENST00000431021 303 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 AL500522.2-201ENST00000448562 343 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 AC006026.2-201ENST00000457376 180 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 RPS4XP13-201ENST00000483219 789 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 AC105137.1-201ENST00000484355 562 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 AL132838.2-201ENST00000492041 314 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.64□□□□□ -1.67
PRPF40AO75400 RNU6-612P-201ENST00000516909 102 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 RNU7-4P-201ENST00000516961 62 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 RNU6-1183P-201ENST00000517054 60 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.64□□□□□ -1.67
PRPF40AO75400 CYCSP29-201ENST00000533731 318 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 TOMM20P2-201ENST00000540082 421 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 H3F3AP1-201ENST00000559984 334 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 SRGNP1-201ENST00000603392 451 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 AL138825.1-201ENST00000618587 192 ntBASIC4.64□□□□□ -1.67
PRPF40AO75400 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.64□□□□□ -1.67
PRPF40AO75400 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.64□□□□□ -1.67
PRPF40AO75400 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
PRPF40AO75400 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF40AO75400 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF40AO75400 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
PRPF40AO75400 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PRPF40AO75400 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PRPF40AO75400 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
PRPF40AO75400 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PRPF40AO75400 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PRPF40AO75400 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.63□□□□□ -1.67
PRPF40AO75400 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
PRPF40AO75400 RNU6-78P-201ENST00000362897 107 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 RNU1-132P-201ENST00000364300 164 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 RNU6-574P-201ENST00000384265 107 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 DPH3P2-201ENST00000422618 250 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 EIF4EP2-201ENST00000422816 654 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.63□□□□□ -1.67
PRPF40AO75400 RPL7P2-201ENST00000427639 268 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.63□□□□□ -1.67
PRPF40AO75400 IPO7P1-201ENST00000442031 636 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.63□□□□□ -1.67
PRPF40AO75400 AC013470.1-201ENST00000453438 462 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 AL353752.1-201ENST00000454946 260 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 UQCRHP4-201ENST00000471686 272 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 RN7SL271P-201ENST00000487601 295 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 RPL29P14-201ENST00000495837 428 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.63□□□□□ -1.67
PRPF40AO75400 AC008958.1-201ENST00000511047 682 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 MTCO2P24-201ENST00000515611 426 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 RNU6-703P-201ENST00000516946 107 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.63□□□□□ -1.67
PRPF40AO75400 AC005476.1-201ENST00000554427 397 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 AC113195.1-201ENST00000579952 141 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 AC104695.3-201ENST00000604052 296 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 AL445567.2-201ENST00000618935 498 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 AC091812.1-201ENST00000432235 1948 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.63□□□□□ -1.67
PRPF40AO75400 MTND5P9-201ENST00000503854 1755 ntBASIC4.63□□□□□ -1.67
PRPF40AO75400 ZNF299P-201ENST00000406845 1804 ntBASIC4.62□□□□□ -1.67
PRPF40AO75400 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PRPF40AO75400 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PRPF40AO75400 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PRPF40AO75400 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.62□□□□□ -1.67
PRPF40AO75400 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.62□□□□□ -1.67
PRPF40AO75400 Y_RNA.485-201ENST00000384395 102 ntBASIC4.62□□□□□ -1.67
PRPF40AO75400 MIR625-201ENST00000385047 85 ntBASIC4.62□□□□□ -1.67
PRPF40AO75400 Y_RNA.645-201ENST00000391229 102 ntBASIC4.62□□□□□ -1.67
PRPF40AO75400 AL138885.1-201ENST00000405921 675 ntBASIC4.62□□□□□ -1.67
PRPF40AO75400 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.62□□□□□ -1.67
PRPF40AO75400 RPL26P27-201ENST00000414397 437 ntBASIC4.62□□□□□ -1.67
PRPF40AO75400 HMGB1P12-201ENST00000438594 598 ntBASIC4.62□□□□□ -1.67
PRPF40AO75400 AC124916.1-201ENST00000444020 547 ntBASIC4.62□□□□□ -1.67
PRPF40AO75400 HIGD1AP2-201ENST00000446367 280 ntBASIC4.62□□□□□ -1.67
PRPF40AO75400 MTATP6P7-201ENST00000453315 681 ntBASIC4.62□□□□□ -1.67
PRPF40AO75400 SNRPGP5-201ENST00000456003 220 ntBASIC4.62□□□□□ -1.67
PRPF40AO75400 AC084357.1-201ENST00000473404 255 ntBASIC4.62□□□□□ -1.67
PRPF40AO75400 AC091167.1-201ENST00000492017 396 ntBASIC4.62□□□□□ -1.67
PRPF40AO75400 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.62□□□□□ -1.67
PRPF40AO75400 COX6CP5-201ENST00000527162 228 ntBASIC4.62□□□□□ -1.67
PRPF40AO75400 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.62□□□□□ -1.67
PRPF40AO75400 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.62□□□□□ -1.67
PRPF40AO75400 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.62□□□□□ -1.67
PRPF40AO75400 AC025627.2-201ENST00000576220 160 ntBASIC4.62□□□□□ -1.67
PRPF40AO75400 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.62□□□□□ -1.67
PRPF40AO75400 AL158827.2-201ENST00000602494 330 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms