Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.14□□□□□ -1.75
RFXAPO00287 AC013470.1-201ENST00000453438 462 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 RPL21P41-201ENST00000459863 264 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 AC010469.1-201ENST00000463864 576 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 AC010469.2-201ENST00000496412 480 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.14□□□□□ -1.75
RFXAPO00287 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.14□□□□□ -1.75
RFXAPO00287 NDUFB4P9-201ENST00000511646 388 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.14□□□□□ -1.75
RFXAPO00287 RNU6-390P-201ENST00000516259 103 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 RNU6-346P-201ENST00000516288 111 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 Y_RNA.713-201ENST00000517013 96 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 IGLVIV-53-201ENST00000520107 367 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 AC087441.2-201ENST00000529141 262 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 TRAV32-201ENST00000553993 340 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.14□□□□□ -1.75
RFXAPO00287 MIR4273-201ENST00000582824 84 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 NF1P5-201ENST00000588287 448 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 AC123912.5-201ENST00000605470 343 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.14□□□□□ -1.75
RFXAPO00287 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 AC140113.4-201ENST00000622087 222 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 AC021753.1-201ENST00000635724 168 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
RFXAPO00287 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
RFXAPO00287 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RFXAPO00287 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
RFXAPO00287 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RFXAPO00287 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.13□□□□□ -1.75
RFXAPO00287 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.13□□□□□ -1.75
RFXAPO00287 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RFXAPO00287 MIR448-201ENST00000362131 111 ntBASIC4.13□□□□□ -1.75
RFXAPO00287 MIR628-201ENST00000385229 95 ntBASIC4.13□□□□□ -1.75
RFXAPO00287 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RFXAPO00287 AC073063.1-201ENST00000434352 607 ntBASIC4.13□□□□□ -1.75
RFXAPO00287 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RFXAPO00287 HMGB1P25-201ENST00000468402 607 ntBASIC4.13□□□□□ -1.75
RFXAPO00287 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.13□□□□□ -1.75
RFXAPO00287 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.13□□□□□ -1.75
RFXAPO00287 AL121917.1-203ENST00000605534 577 ntBASIC4.13□□□□□ -1.75
RFXAPO00287 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.13□□□□□ -1.75
RFXAPO00287 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.13□□□□□ -1.75
RFXAPO00287 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.13□□□□□ -1.75
RFXAPO00287 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFXAPO00287 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFXAPO00287 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.12□□□□□ -1.75
RFXAPO00287 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFXAPO00287 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFXAPO00287 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.12□□□□□ -1.75
RFXAPO00287 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RFXAPO00287 RNU1-108P-201ENST00000362556 161 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 Y_RNA.83-201ENST00000363005 113 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 Y_RNA.170-201ENST00000363746 110 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 RNU6-339P-201ENST00000384310 107 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 Y_RNA.592-201ENST00000410274 109 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 COX6CP10-201ENST00000416832 224 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.12□□□□□ -1.75
RFXAPO00287 AC092573.2-201ENST00000434546 243 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 RPL23AP33-201ENST00000442301 452 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.12□□□□□ -1.75
RFXAPO00287 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.12□□□□□ -1.75
RFXAPO00287 AC012158.1-204ENST00000483430 465 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 AC067942.3-201ENST00000512025 362 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 RNU6-1338P-201ENST00000516328 91 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 AP000859.1-201ENST00000525536 307 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 CR383656.7-201ENST00000548164 174 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 AC005951.2-201ENST00000576282 495 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 MIR5701-3-201ENST00000578890 82 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 MIR5187-201ENST00000583479 76 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 MIR5701-1-201ENST00000585138 82 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 MIR15A-201ENST00000607334 83 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 AC015813.4-201ENST00000610469 179 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 MIR5701-2-201ENST00000615634 82 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 SNORD39.4-201ENST00000620099 78 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 AL031601.2-202ENST00000622650 282 ntBASIC4.12□□□□□ -1.75
RFXAPO00287 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
RFXAPO00287 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
RFXAPO00287 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.12□□□□□ -1.75
RFXAPO00287 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFXAPO00287 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFXAPO00287 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RFXAPO00287 AP001148.1-201ENST00000624124 2359 ntBASIC4.11□□□□□ -1.75
RFXAPO00287 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFXAPO00287 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.11□□□□□ -1.75
RFXAPO00287 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFXAPO00287 RNA5SP50-201ENST00000363731 107 ntBASIC4.11□□□□□ -1.75
RFXAPO00287 Y_RNA.458-201ENST00000384240 102 ntBASIC4.11□□□□□ -1.75
RFXAPO00287 Y_RNA.500-201ENST00000384466 111 ntBASIC4.11□□□□□ -1.75
RFXAPO00287 Y_RNA.541-201ENST00000384640 113 ntBASIC4.11□□□□□ -1.75
RFXAPO00287 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.11□□□□□ -1.75
RFXAPO00287 CYCSP33-201ENST00000414485 327 ntBASIC4.11□□□□□ -1.75
RFXAPO00287 RPS15AP40-201ENST00000419621 391 ntBASIC4.11□□□□□ -1.75
RFXAPO00287 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.11□□□□□ -1.75
RFXAPO00287 MTCO3P29-201ENST00000432119 779 ntBASIC4.11□□□□□ -1.75
RFXAPO00287 AC008155.2-201ENST00000464337 397 ntBASIC4.11□□□□□ -1.75
RFXAPO00287 RNU6-677P-201ENST00000516914 101 ntBASIC4.11□□□□□ -1.75
RFXAPO00287 SCARNA24.2-201ENST00000516968 130 ntBASIC4.11□□□□□ -1.75
RFXAPO00287 AC144568.1-201ENST00000520139 137 ntBASIC4.11□□□□□ -1.75
RFXAPO00287 AC087369.1-201ENST00000520775 996 ntBASIC4.11□□□□□ -1.75
RFXAPO00287 AC022559.1-201ENST00000520905 205 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms