Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHB11Q9Y5F2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 FTLP6-201ENST00000355274 422 ntBASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 RNU1-140P-201ENST00000365040 165 ntBASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 SNORA62-201ENST00000365493 153 ntBASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 SNORD116-18-201ENST00000383961 92 ntBASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 RNU6-959P-201ENST00000384671 107 ntBASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 AC024067.1-201ENST00000426199 223 ntBASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 AC007969.2-201ENST00000441891 191 ntBASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 BTF3P6-201ENST00000448054 499 ntBASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 AC073073.1-201ENST00000493920 463 ntBASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 AC020593.1-201ENST00000507399 299 ntBASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 RNU6-62P-201ENST00000516526 102 ntBASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 RAD17P1-201ENST00000418130 2042 ntBASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 AL109809.4-201ENST00000603520 2185 ntBASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 ZNF204P-201ENST00000416749 2397 ntBASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHB11Q9Y5F2 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 AC018529.3-201ENST00000624212 2254 ntBASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 SNORD56.1-201ENST00000362913 68 ntBASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 RNU6-1290P-201ENST00000362957 109 ntBASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 RNVU1-6-201ENST00000364688 164 ntBASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 RNU6-1130P-201ENST00000365434 107 ntBASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 AL357139.1-201ENST00000407792 426 ntBASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 AC068287.1-201ENST00000430283 295 ntBASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 AL512844.2-201ENST00000433990 593 ntBASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 AC011753.3-201ENST00000443436 406 ntBASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 RN7SL385P-201ENST00000468873 276 ntBASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 RNA5SP43-201ENST00000516559 110 ntBASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 IGKV1-32-201ENST00000519290 311 ntBASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 AC091042.1-201ENST00000579213 173 ntBASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 AC019159.1-201ENST00000605094 187 ntBASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 AL357075.2-201ENST00000614906 189 ntBASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHB11Q9Y5F2 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.84□□□□□ -1.64
PCDHB11Q9Y5F2 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.84□□□□□ -1.64
PCDHB11Q9Y5F2 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PCDHB11Q9Y5F2 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 RNU6-653P-201ENST00000363074 106 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 RNU6-778P-201ENST00000363269 103 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 RNU1-32P-201ENST00000363937 159 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 Y_RNA.343-201ENST00000365354 112 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 SNORA70.10-201ENST00000384515 134 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 MIR325-201ENST00000385260 98 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 RPL26P27-201ENST00000414397 437 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 AL450023.3-201ENST00000440592 271 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 GPM6BP3-201ENST00000442797 145 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 AC073264.2-201ENST00000448886 166 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 RN7SL354P-201ENST00000469282 294 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 RPS4XP22-201ENST00000480755 780 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 RN7SL459P-201ENST00000481078 302 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 AC016632.1-201ENST00000503994 196 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 AP006289.1-201ENST00000538089 277 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 HSPE1P4-201ENST00000550617 308 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 AC136624.4-201ENST00000573044 370 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 MIR4472-2-201ENST00000582069 67 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 FTX_3.1-201ENST00000610451 147 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 AC048347.1-201ENST00000624621 427 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 AL672167.1-204ENST00000641875 3017 ntBASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHB11Q9Y5F2 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PCDHB11Q9Y5F2 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHB11Q9Y5F2 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB11Q9Y5F2 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHB11Q9Y5F2 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms