Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
AP4E1Q9UPM8 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 Z73965.1-201ENST00000623412 2297 ntBASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 SNORD113-1-201ENST00000365321 69 ntBASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 RNU6-102P-201ENST00000384485 104 ntBASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 MIR10A-201ENST00000385043 110 ntBASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 AL157831.1-201ENST00000426134 473 ntBASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 AL627311.1-201ENST00000431514 115 ntBASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 AL445305.1-201ENST00000432577 575 ntBASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 PPBPP1-201ENST00000510807 373 ntBASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 SCARNA24.2-201ENST00000516968 130 ntBASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 MIR2355-201ENST00000517199 87 ntBASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 RNU4-60P-201ENST00000517239 135 ntBASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 AC109479.2-201ENST00000517842 174 ntBASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 AC004024.1-201ENST00000549244 247 ntBASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 MTND6P33-201ENST00000571794 183 ntBASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 MIR4458-201ENST00000578872 75 ntBASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 AC010620.2-201ENST00000600135 313 ntBASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.44□□□□□ -1.7
AP4E1Q9UPM8 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 RNU6-227P-201ENST00000362865 103 ntBASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 U3.22-201ENST00000391120 215 ntBASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 RPL23AP81-201ENST00000455252 467 ntBASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 RNU7-87P-201ENST00000459343 62 ntBASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 AC011276.1-201ENST00000469688 323 ntBASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 ANXA2P1-201ENST00000505539 926 ntBASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 AL592156.1-201ENST00000508758 304 ntBASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 RNU6-496P-201ENST00000516145 99 ntBASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 SCARNA15.2-201ENST00000516409 127 ntBASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 Y_RNA.683-201ENST00000516508 93 ntBASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 RNU6-1012P-201ENST00000516606 109 ntBASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 Y_RNA.706-201ENST00000516933 99 ntBASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 AL139395.1-201ENST00000603662 160 ntBASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 Y_RNA.772-201ENST00000606692 102 ntBASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 AC006065.5-201ENST00000623427 349 ntBASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 AC018529.3-201ENST00000624212 2254 ntBASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.43□□□□□ -1.7
AP4E1Q9UPM8 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 SNORD113-8-201ENST00000363497 74 ntBASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 RNA5SP509-201ENST00000364577 119 ntBASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 Y_RNA.506-201ENST00000384494 102 ntBASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 SNORA40C-201ENST00000391285 128 ntBASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 RNU6-493P-201ENST00000391321 108 ntBASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 AL365440.1-201ENST00000436135 2167 ntBASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 RN7SL691P-201ENST00000494487 301 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms