Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 AC106754.2-201ENST00000623006 233 ntBASIC5.06□□□□□ -1.6
NXF1Q9UBU9 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 PCAT14-202ENST00000627127 3935 ntBASIC5.06□□□□□ -1.6
NXF1Q9UBU9 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NXF1Q9UBU9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 ZNF720P1-201ENST00000562403 1939 ntBASIC5.05□□□□□ -1.6
NXF1Q9UBU9 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 RNY1P11-201ENST00000363759 113 ntBASIC5.05□□□□□ -1.6
NXF1Q9UBU9 RNU6-573P-201ENST00000383938 106 ntBASIC5.05□□□□□ -1.6
NXF1Q9UBU9 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 AC009296.1-201ENST00000443146 155 ntBASIC5.05□□□□□ -1.6
NXF1Q9UBU9 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 AK3P2-201ENST00000507976 429 ntBASIC5.05□□□□□ -1.6
NXF1Q9UBU9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 TRAV37-201ENST00000553906 342 ntBASIC5.05□□□□□ -1.6
NXF1Q9UBU9 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 MIR3121-201ENST00000579680 77 ntBASIC5.05□□□□□ -1.6
NXF1Q9UBU9 AL670379.3-201ENST00000605040 251 ntBASIC5.05□□□□□ -1.6
NXF1Q9UBU9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 STX3-208ENST00000641815 3236 ntBASIC5.05□□□□□ -1.6
NXF1Q9UBU9 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NXF1Q9UBU9 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NXF1Q9UBU9 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NXF1Q9UBU9 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NXF1Q9UBU9 AC027228.2-201ENST00000567141 2154 ntBASIC5.04□□□□□ -1.6
NXF1Q9UBU9 AF127577.6-201ENST00000623352 2191 ntBASIC5.04□□□□□ -1.6
NXF1Q9UBU9 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
NXF1Q9UBU9 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NXF1Q9UBU9 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
NXF1Q9UBU9 RNU1-139P-201ENST00000391307 165 ntBASIC5.04□□□□□ -1.6
NXF1Q9UBU9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.04□□□□□ -1.6
NXF1Q9UBU9 AL591034.1-201ENST00000407447 340 ntBASIC5.04□□□□□ -1.6
NXF1Q9UBU9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC5.04□□□□□ -1.6
NXF1Q9UBU9 AP000907.1-201ENST00000428428 510 ntBASIC5.04□□□□□ -1.6
NXF1Q9UBU9 H2AFZP5-201ENST00000446960 382 ntBASIC5.04□□□□□ -1.6
NXF1Q9UBU9 RN7SL354P-201ENST00000469282 294 ntBASIC5.04□□□□□ -1.6
NXF1Q9UBU9 AL121594.1-201ENST00000475906 575 ntBASIC5.04□□□□□ -1.6
NXF1Q9UBU9 RPL23AP45-201ENST00000476406 468 ntBASIC5.04□□□□□ -1.6
NXF1Q9UBU9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.04□□□□□ -1.6
NXF1Q9UBU9 RN7SKP164-201ENST00000516138 266 ntBASIC5.04□□□□□ -1.6
NXF1Q9UBU9 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.04□□□□□ -1.6
NXF1Q9UBU9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.04□□□□□ -1.6
NXF1Q9UBU9 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.04□□□□□ -1.6
NXF1Q9UBU9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.04□□□□□ -1.6
NXF1Q9UBU9 AC062037.1-201ENST00000605302 128 ntBASIC5.04□□□□□ -1.6
NXF1Q9UBU9 AC069294.1-201ENST00000608397 350 ntBASIC5.04□□□□□ -1.6
NXF1Q9UBU9 SNORD91B-202ENST00000608459 222 ntBASIC5.04□□□□□ -1.6
NXF1Q9UBU9 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.04□□□□□ -1.6
NXF1Q9UBU9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NXF1Q9UBU9 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NXF1Q9UBU9 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NXF1Q9UBU9 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NXF1Q9UBU9 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NXF1Q9UBU9 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
NXF1Q9UBU9 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
NXF1Q9UBU9 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NXF1Q9UBU9 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
NXF1Q9UBU9 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NXF1Q9UBU9 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NXF1Q9UBU9 RN7SKP267-201ENST00000410381 285 ntBASIC5.03□□□□□ -1.6
NXF1Q9UBU9 RNU2-50P-201ENST00000410494 143 ntBASIC5.03□□□□□ -1.6
NXF1Q9UBU9 AC006461.1-201ENST00000412637 326 ntBASIC5.03□□□□□ -1.6
NXF1Q9UBU9 CYP4F29P-201ENST00000420685 446 ntBASIC5.03□□□□□ -1.6
NXF1Q9UBU9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC5.03□□□□□ -1.6
NXF1Q9UBU9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.03□□□□□ -1.6
NXF1Q9UBU9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC5.03□□□□□ -1.6
NXF1Q9UBU9 RPS23P7-201ENST00000466210 444 ntBASIC5.03□□□□□ -1.6
NXF1Q9UBU9 SUMO2P6-201ENST00000505273 288 ntBASIC5.03□□□□□ -1.6
NXF1Q9UBU9 CR383656.7-201ENST00000548164 174 ntBASIC5.03□□□□□ -1.6
NXF1Q9UBU9 AC005176.2-201ENST00000596933 147 ntBASIC5.03□□□□□ -1.6
NXF1Q9UBU9 AC090617.7-201ENST00000623952 126 ntBASIC5.03□□□□□ -1.6
NXF1Q9UBU9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.03□□□□□ -1.6
NXF1Q9UBU9 AC092079.1-201ENST00000558620 1985 ntBASIC5.03□□□□□ -1.6
NXF1Q9UBU9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms