Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RNU2-29P-201ENST00000410423 189 ntBASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 EEF1A1P40-201ENST00000412883 573 ntBASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 MTCO3P46-201ENST00000425787 232 ntBASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 Z82210.1-201ENST00000440037 231 ntBASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 AC087588.1-201ENST00000462203 316 ntBASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 AC006445.2-201ENST00000510061 472 ntBASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 Y_RNA.675-201ENST00000516389 149 ntBASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 RNU6-677P-201ENST00000516914 101 ntBASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 BTF3P12-201ENST00000519620 469 ntBASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 VN1R80P-201ENST00000597126 338 ntBASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 AC107294.3-201ENST00000609211 526 ntBASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 AC135507.2-201ENST00000612443 309 ntBASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 AC126177.8-201ENST00000618339 1015 ntBASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 MTND4P35-201ENST00000604257 1375 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 UBE2L2-201ENST00000254302 429 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 RNU6-1167P-201ENST00000363227 94 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 SNORD56.3-201ENST00000363507 71 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 U3.12-201ENST00000364498 214 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 RNU6-190P-201ENST00000384154 102 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 RNU6-550P-201ENST00000391057 101 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 RNU6-817P-201ENST00000391083 104 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 NDUFB4P5-201ENST00000415445 361 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 AC092809.3-201ENST00000415453 231 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 RPL7P46-201ENST00000425129 740 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 RPL23AP69-201ENST00000431134 458 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 MRPL50P4-201ENST00000446432 475 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 AL590664.1-201ENST00000448065 339 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 AL590639.1-201ENST00000456484 337 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 RPL7P5-201ENST00000471472 736 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 RPL21P99-201ENST00000480369 423 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 AC010265.1-201ENST00000513509 211 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 SNORA31.3-201ENST00000516029 96 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 RNU6-1038P-201ENST00000516516 104 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 Y_RNA.701-201ENST00000516812 110 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 RNU6-685P-201ENST00000517088 95 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 RPL7P20-201ENST00000520308 745 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 AC243972.3-201ENST00000539655 198 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 AL365204.3-201ENST00000612448 685 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 AC006111.3-201ENST00000622137 383 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 AC090574.1-201ENST00000623186 233 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 SCARNA15.3-201ENST00000626315 122 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 SCARNA4.1-201ENST00000628597 123 ntBASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.3□□□□□ -1.88
NCKIPSDQ9NZQ3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 MTND4P14-201ENST00000435799 1354 ntBASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 AC118273.1-201ENST00000525324 3006 ntBASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 Y_RNA.184-201ENST00000363884 108 ntBASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 Y_RNA.245-201ENST00000364493 95 ntBASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 RNU4-66P-201ENST00000365199 138 ntBASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 SNORA48.2-201ENST00000390926 124 ntBASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 SNORA48.5-201ENST00000391143 135 ntBASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 AL606923.1-201ENST00000406616 190 ntBASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 RPL7P12-201ENST00000446719 750 ntBASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 RNU7-66P-201ENST00000459469 62 ntBASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 AC012181.1-201ENST00000479895 423 ntBASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 AC104806.1-201ENST00000508720 308 ntBASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 RNU6-1282P-201ENST00000516735 96 ntBASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.29□□□□□ -1.88
NCKIPSDQ9NZQ3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms