Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.8□□□□□ -2.12
CLN6Q9NWW5 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.8□□□□□ -2.12
CLN6Q9NWW5 AL160275.3-201ENST00000423876 471 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.8□□□□□ -2.12
CLN6Q9NWW5 MTND1P32-201ENST00000433043 938 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.8□□□□□ -2.12
CLN6Q9NWW5 AL161788.1-201ENST00000441805 169 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.8□□□□□ -2.12
CLN6Q9NWW5 FABP5P13-201ENST00000452144 328 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 AC093899.1-201ENST00000457984 376 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 AL139824.2-201ENST00000458731 1095 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CLN6Q9NWW5 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.8□□□□□ -2.12
CLN6Q9NWW5 MTATP6P9-201ENST00000515039 680 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 RNU6-914P-201ENST00000516749 109 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 MIR514B-201ENST00000516774 80 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CLN6Q9NWW5 AC123904.2-201ENST00000548059 300 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.8□□□□□ -2.12
CLN6Q9NWW5 MTND4P33-201ENST00000556706 766 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.8□□□□□ -2.12
CLN6Q9NWW5 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.8□□□□□ -2.12
CLN6Q9NWW5 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CLN6Q9NWW5 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.8□□□□□ -2.12
CLN6Q9NWW5 AC105148.1-201ENST00000604961 409 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 AC087045.1-201ENST00000605856 382 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 RNU6-91P-201ENST00000607774 107 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 AC009974.1-201ENST00000608881 455 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 AC130324.3-201ENST00000614165 542 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 AC006338.1-201ENST00000618453 749 ntBASIC1.8□□□□□ -2.12
CLN6Q9NWW5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CLN6Q9NWW5 Y_RNA.534-201ENST00000384599 112 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 RNU6-925P-201ENST00000384629 104 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 MIR518D-201ENST00000385014 87 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 SNORA40C-201ENST00000391285 128 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 RPS20P2-201ENST00000402520 389 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 SNORA11-201ENST00000408789 128 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 AL139413.1-201ENST00000421309 217 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 AIMP1P2-201ENST00000425294 312 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 AL591704.1-201ENST00000432574 275 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.79□□□□□ -2.12
CLN6Q9NWW5 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.79□□□□□ -2.12
CLN6Q9NWW5 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.79□□□□□ -2.12
CLN6Q9NWW5 RNA5SP233-201ENST00000459153 113 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 AC107032.1-201ENST00000485945 480 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 RPS3AP22-201ENST00000488297 769 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 FAM92A1P2-202ENST00000504766 877 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 MTND3P3-201ENST00000505004 126 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.79□□□□□ -2.12
CLN6Q9NWW5 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.79□□□□□ -2.12
CLN6Q9NWW5 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CLN6Q9NWW5 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.79□□□□□ -2.12
CLN6Q9NWW5 AC116347.2-201ENST00000514912 523 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 RNU6-678P-201ENST00000516832 109 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 RNU6-1092P-201ENST00000516955 87 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.79□□□□□ -2.12
CLN6Q9NWW5 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.79□□□□□ -2.12
CLN6Q9NWW5 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.79□□□□□ -2.12
CLN6Q9NWW5 PSMA3P-201ENST00000555485 635 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 AL157871.3-201ENST00000557231 293 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 MIR4529-201ENST00000578110 78 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.79□□□□□ -2.12
CLN6Q9NWW5 AP001981.2-201ENST00000603241 418 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 AL031281.1-201ENST00000604049 488 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 AC013244.3-201ENST00000605614 388 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 AC005014.3-201ENST00000605985 190 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 AC010378.1-201ENST00000619270 362 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 AC022306.3-201ENST00000619930 550 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 SDR42E1P4-201ENST00000620894 481 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 MIR6873-201ENST00000622788 63 ntBASIC1.79□□□□□ -2.12
CLN6Q9NWW5 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.79□□□□□ -2.12
CLN6Q9NWW5 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.79□□□□□ -2.12
CLN6Q9NWW5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CLN6Q9NWW5 AC106754.1-201ENST00000562632 1513 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 Y_RNA.33-201ENST00000362591 102 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 RNU6-511P-201ENST00000363496 107 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 RNY4P16-201ENST00000364768 94 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 SNORA4.3-201ENST00000365564 137 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 MIR483-201ENST00000385070 76 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 RNU4-53P-201ENST00000410828 140 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 MTCO2P8-201ENST00000412213 658 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.78□□□□□ -2.12
CLN6Q9NWW5 HMGN2P19-201ENST00000425149 265 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.78□□□□□ -2.12
CLN6Q9NWW5 MTND1P20-201ENST00000430341 950 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 HMGB3P12-201ENST00000438745 556 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 AC004854.1-201ENST00000440356 349 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.78□□□□□ -2.12
CLN6Q9NWW5 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.78□□□□□ -2.12
CLN6Q9NWW5 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.78□□□□□ -2.12
CLN6Q9NWW5 DUXAP8-207ENST00000456786 622 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
CLN6Q9NWW5 MTND4P2-201ENST00000507767 1203 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 AC117522.2-201ENST00000510049 657 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 RNU5B-3P-201ENST00000516601 115 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 RNU6-1003P-201ENST00000517099 105 ntBASIC1.78□□□□□ -2.12
CLN6Q9NWW5 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.78□□□□□ -2.12
CLN6Q9NWW5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.78□□□□□ -2.12
CLN6Q9NWW5 IGKV3-31-201ENST00000523109 329 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms