Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC009646.1-201ENST00000510455 318 ntBASIC3.34□□□□□ -1.87
SIN3AQ96ST3 AC008413.1-201ENST00000511864 177 ntBASIC3.34□□□□□ -1.87
SIN3AQ96ST3 TTC39CP1-201ENST00000512513 755 ntBASIC3.34□□□□□ -1.87
SIN3AQ96ST3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.34□□□□□ -1.87
SIN3AQ96ST3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.34□□□□□ -1.87
SIN3AQ96ST3 OR5B19P-201ENST00000531766 928 ntBASIC3.34□□□□□ -1.87
SIN3AQ96ST3 AK6P1-201ENST00000540219 478 ntBASIC3.34□□□□□ -1.87
SIN3AQ96ST3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.34□□□□□ -1.87
SIN3AQ96ST3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.34□□□□□ -1.87
SIN3AQ96ST3 AL359212.1-201ENST00000556608 614 ntBASIC3.34□□□□□ -1.87
SIN3AQ96ST3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SIN3AQ96ST3 MIR5007-201ENST00000583098 95 ntBASIC3.34□□□□□ -1.87
SIN3AQ96ST3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.34□□□□□ -1.87
SIN3AQ96ST3 AC060766.3-201ENST00000591442 263 ntBASIC3.34□□□□□ -1.87
SIN3AQ96ST3 AC107304.1-201ENST00000604229 296 ntBASIC3.34□□□□□ -1.87
SIN3AQ96ST3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SIN3AQ96ST3 U4.5-201ENST00000617137 123 ntBASIC3.34□□□□□ -1.87
SIN3AQ96ST3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SIN3AQ96ST3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SIN3AQ96ST3 AC008568.2-201ENST00000623862 2313 ntBASIC3.33□□□□□ -1.88
SIN3AQ96ST3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SIN3AQ96ST3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SIN3AQ96ST3 Y_RNA.372-201ENST00000365599 102 ntBASIC3.33□□□□□ -1.88
SIN3AQ96ST3 RNU2-9P-201ENST00000410194 145 ntBASIC3.33□□□□□ -1.88
SIN3AQ96ST3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.33□□□□□ -1.88
SIN3AQ96ST3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.33□□□□□ -1.88
SIN3AQ96ST3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SIN3AQ96ST3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.33□□□□□ -1.88
SIN3AQ96ST3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SIN3AQ96ST3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.33□□□□□ -1.88
SIN3AQ96ST3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.33□□□□□ -1.88
SIN3AQ96ST3 AC011352.1-201ENST00000512300 793 ntBASIC3.33□□□□□ -1.88
SIN3AQ96ST3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.33□□□□□ -1.88
SIN3AQ96ST3 ZNF519P2-201ENST00000557032 169 ntBASIC3.33□□□□□ -1.88
SIN3AQ96ST3 AC136619.2-201ENST00000563361 631 ntBASIC3.33□□□□□ -1.88
SIN3AQ96ST3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.33□□□□□ -1.88
SIN3AQ96ST3 ZNF680P1-201ENST00000436625 1469 ntBASIC3.33□□□□□ -1.88
SIN3AQ96ST3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SIN3AQ96ST3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SIN3AQ96ST3 AL136164.4-201ENST00000625013 2135 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 RNU6-1120P-201ENST00000362988 108 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 RNA5SP126-201ENST00000365092 109 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SIN3AQ96ST3 SNORA24.1-201ENST00000384401 135 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 SAR1AP2-201ENST00000392696 594 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SIN3AQ96ST3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.32□□□□□ -1.88
SIN3AQ96ST3 USP9YP28-201ENST00000435142 589 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 TAAR7P-201ENST00000436141 242 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 NEFMP1-201ENST00000443423 1006 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 HIGD1AP2-201ENST00000446367 280 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 MRPS17P3-201ENST00000465453 385 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 AC008571.1-201ENST00000467232 300 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 AC116562.3-201ENST00000506136 177 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 AC117522.1-201ENST00000509821 380 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.32□□□□□ -1.88
SIN3AQ96ST3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.32□□□□□ -1.88
SIN3AQ96ST3 RNU6-927P-201ENST00000516199 100 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.32□□□□□ -1.88
SIN3AQ96ST3 AC068587.5-201ENST00000528506 175 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 AP003034.1-201ENST00000534621 422 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.32□□□□□ -1.88
SIN3AQ96ST3 AC025165.5-201ENST00000602802 578 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 AP001330.5-201ENST00000607176 411 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.32□□□□□ -1.88
SIN3AQ96ST3 AC092794.1-201ENST00000612734 582 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 AC090517.2-201ENST00000614966 680 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
SIN3AQ96ST3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.32□□□□□ -1.88
SIN3AQ96ST3 AL137003.2-201ENST00000606924 2538 ntBASIC3.32□□□□□ -1.88
SIN3AQ96ST3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.31□□□□□ -1.88
SIN3AQ96ST3 Y_RNA.381-201ENST00000365666 102 ntBASIC3.31□□□□□ -1.88
SIN3AQ96ST3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SIN3AQ96ST3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.31□□□□□ -1.88
SIN3AQ96ST3 RNU4-53P-201ENST00000410828 140 ntBASIC3.31□□□□□ -1.88
SIN3AQ96ST3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.31□□□□□ -1.88
SIN3AQ96ST3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.31□□□□□ -1.88
SIN3AQ96ST3 ISCA1P1-201ENST00000426679 387 ntBASIC3.31□□□□□ -1.88
SIN3AQ96ST3 TIMM9P3-201ENST00000428659 274 ntBASIC3.31□□□□□ -1.88
SIN3AQ96ST3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.31□□□□□ -1.88
SIN3AQ96ST3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.31□□□□□ -1.88
SIN3AQ96ST3 AL356867.1-201ENST00000429623 299 ntBASIC3.31□□□□□ -1.88
SIN3AQ96ST3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.31□□□□□ -1.88
SIN3AQ96ST3 CBWD4P-201ENST00000445695 655 ntBASIC3.31□□□□□ -1.88
SIN3AQ96ST3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.31□□□□□ -1.88
SIN3AQ96ST3 RPL23AP20-201ENST00000447965 421 ntBASIC3.31□□□□□ -1.88
SIN3AQ96ST3 AC003071.1-201ENST00000451219 789 ntBASIC3.31□□□□□ -1.88
SIN3AQ96ST3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.31□□□□□ -1.88
SIN3AQ96ST3 AC022364.2-201ENST00000457963 554 ntBASIC3.31□□□□□ -1.88
SIN3AQ96ST3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.31□□□□□ -1.88
SIN3AQ96ST3 RPS20P22-201ENST00000473700 357 ntBASIC3.31□□□□□ -1.88
SIN3AQ96ST3 AC008549.1-201ENST00000512900 643 ntBASIC3.31□□□□□ -1.88
SIN3AQ96ST3 RNU1-61P-201ENST00000516107 151 ntBASIC3.31□□□□□ -1.88
SIN3AQ96ST3 RNU6-826P-201ENST00000516827 104 ntBASIC3.31□□□□□ -1.88
SIN3AQ96ST3 OR4R1P-201ENST00000529879 463 ntBASIC3.31□□□□□ -1.88
SIN3AQ96ST3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.31□□□□□ -1.88
SIN3AQ96ST3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.31□□□□□ -1.88
SIN3AQ96ST3 HMGB1P33-201ENST00000563485 527 ntBASIC3.31□□□□□ -1.88
SIN3AQ96ST3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms