Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC092954.2-201ENST00000609103 430 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 AL589994.2-201ENST00000621124 579 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 CR381653.2-201ENST00000624041 768 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 SEPT14P19-203ENST00000633205 211 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 MTND4P35-201ENST00000604257 1375 ntBASIC2.73□□□□□ -1.97
PDLIM5Q96HC4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 AC004944.1-201ENST00000517807 3059 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 Y_RNA.159-201ENST00000363674 87 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 CALM2P3-201ENST00000400429 449 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 MIR548F1-201ENST00000408667 84 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 USP9YP6-201ENST00000413550 854 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 MTCO2P19-201ENST00000427513 598 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 PSPHP1-201ENST00000450062 261 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 MTND5P30-201ENST00000452896 1731 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 RN7SL297P-201ENST00000483161 293 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 AIG1P1-201ENST00000503376 148 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 AL117351.2-201ENST00000513571 157 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 RNU6-677P-201ENST00000516914 101 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 RNU6-703P-201ENST00000516946 107 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 MTND4LP26-201ENST00000518144 282 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 AC027807.1-201ENST00000559921 996 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 BNIP3P33-201ENST00000598912 569 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 AL391813.1-201ENST00000603098 260 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 AC007619.2-201ENST00000605743 379 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 AL162274.2-201ENST00000614406 332 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 ATP5A1P2-202ENST00000616464 443 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 MIR6863-201ENST00000636112 90 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 U6.99-201ENST00000637524 83 ntBASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
PDLIM5Q96HC4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.97
PDLIM5Q96HC4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 OR4G2P-201ENST00000328113 903 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 RNU6-288P-201ENST00000363690 104 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 MTCO3P40-201ENST00000392516 676 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 RPL17P50-201ENST00000396131 546 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 RPS12P24-201ENST00000412619 387 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 AC137499.1-201ENST00000427602 88 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 AL161651.1-201ENST00000440882 223 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 RPS24P13-201ENST00000442520 397 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 AC107626.1-201ENST00000471084 183 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 EIF4EP3-201ENST00000498782 656 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 HIGD1AP13-201ENST00000509878 289 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 SCARNA24.1-201ENST00000516465 137 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 RNU6-1092P-201ENST00000516955 87 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 ARL2BPP2-201ENST00000550907 489 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 AC136619.2-201ENST00000563361 631 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 AL451007.1-201ENST00000595491 289 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 AC174048.1-201ENST00000603389 144 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 AC007363.1-201ENST00000604736 620 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 AC126118.1-201ENST00000607744 628 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 AC017083.3-201ENST00000609955 700 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 AC073534.2-201ENST00000620377 381 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 MIR7157-201ENST00000635801 60 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 MTND4P27-201ENST00000450813 1354 ntBASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PDLIM5Q96HC4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 MIR208A-201ENST00000362287 71 ntBASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 SNORD56.2-201ENST00000363242 71 ntBASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 RNU6-39P-201ENST00000384344 107 ntBASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 SNORA44-201ENST00000384584 132 ntBASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 RNU6-19P-201ENST00000384718 107 ntBASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 MIR181A1-201ENST00000385026 110 ntBASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 RNU4-55P-201ENST00000410731 137 ntBASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 ELOCP4-201ENST00000420090 333 ntBASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 AC003071.1-201ENST00000451219 789 ntBASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 AC007182.2-201ENST00000489251 402 ntBASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 AC019235.1-201ENST00000503847 207 ntBASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 RNU6-314P-201ENST00000516574 104 ntBASIC2.7□□□□□ -1.98
PDLIM5Q96HC4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms