Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
SNRNP40Q96DI7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SNRNP40Q96DI7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.56□□□□□ -2
SNRNP40Q96DI7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.56□□□□□ -2
SNRNP40Q96DI7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.56□□□□□ -2
SNRNP40Q96DI7 AC131280.1-202ENST00000624067 4211 ntBASIC2.55□□□□□ -2
SNRNP40Q96DI7 MIR412-201ENST00000362142 91 ntBASIC2.55□□□□□ -2
SNRNP40Q96DI7 RNU6-858P-201ENST00000362436 107 ntBASIC2.55□□□□□ -2
SNRNP40Q96DI7 Y_RNA.22-201ENST00000362492 102 ntBASIC2.55□□□□□ -2
SNRNP40Q96DI7 RNU1-112P-201ENST00000364401 164 ntBASIC2.55□□□□□ -2
SNRNP40Q96DI7 RNU6-297P-201ENST00000384636 107 ntBASIC2.55□□□□□ -2
SNRNP40Q96DI7 RNU6-748P-201ENST00000384648 107 ntBASIC2.55□□□□□ -2
SNRNP40Q96DI7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.55□□□□□ -2
SNRNP40Q96DI7 AL138827.1-201ENST00000402666 306 ntBASIC2.55□□□□□ -2
SNRNP40Q96DI7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.55□□□□□ -2
SNRNP40Q96DI7 CALM2P2-201ENST00000428512 440 ntBASIC2.55□□□□□ -2
SNRNP40Q96DI7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.55□□□□□ -2
SNRNP40Q96DI7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.55□□□□□ -2
SNRNP40Q96DI7 AC244505.5-201ENST00000443639 207 ntBASIC2.55□□□□□ -2
SNRNP40Q96DI7 AL513124.1-201ENST00000450410 614 ntBASIC2.55□□□□□ -2
SNRNP40Q96DI7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.55□□□□□ -2
SNRNP40Q96DI7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.55□□□□□ -2
SNRNP40Q96DI7 ACA59.2-201ENST00000517061 156 ntBASIC2.55□□□□□ -2
SNRNP40Q96DI7 MTCYBP20-201ENST00000524239 1129 ntBASIC2.55□□□□□ -2
SNRNP40Q96DI7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.55□□□□□ -2
SNRNP40Q96DI7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.55□□□□□ -2
SNRNP40Q96DI7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.55□□□□□ -2
SNRNP40Q96DI7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.55□□□□□ -2
SNRNP40Q96DI7 AC234778.2-201ENST00000566241 354 ntBASIC2.55□□□□□ -2
SNRNP40Q96DI7 AL645944.1-201ENST00000603857 493 ntBASIC2.55□□□□□ -2
SNRNP40Q96DI7 AC064872.1-201ENST00000604823 1072 ntBASIC2.55□□□□□ -2
SNRNP40Q96DI7 Z84480.1-201ENST00000605131 311 ntBASIC2.55□□□□□ -2
SNRNP40Q96DI7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.55□□□□□ -2
SNRNP40Q96DI7 AL359854.1-201ENST00000614203 1594 ntBASIC2.55□□□□□ -2
SNRNP40Q96DI7 AC072046.2-201ENST00000618366 268 ntBASIC2.55□□□□□ -2
SNRNP40Q96DI7 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.55□□□□□ -2
SNRNP40Q96DI7 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.55□□□□□ -2
SNRNP40Q96DI7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.55□□□□□ -2
SNRNP40Q96DI7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.55□□□□□ -2
SNRNP40Q96DI7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
SNRNP40Q96DI7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.54□□□□□ -2
SNRNP40Q96DI7 CDC27P3-201ENST00000635418 1910 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.54□□□□□ -2
SNRNP40Q96DI7 U3.6-201ENST00000363622 211 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 RNA5SP68-201ENST00000363885 119 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 XGY1-201ENST00000381172 446 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 Z98749.2-208ENST00000381646 500 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 RNU1-109P-201ENST00000383960 147 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 RNU6-166P-201ENST00000384371 107 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.54□□□□□ -2
SNRNP40Q96DI7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.54□□□□□ -2
SNRNP40Q96DI7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 TOMM20P4-201ENST00000427861 435 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.54□□□□□ -2
SNRNP40Q96DI7 MTATP6P16-201ENST00000434543 526 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 RPS15AP9-201ENST00000439856 381 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 KATNBL1P3-201ENST00000443475 909 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 AC104389.3-201ENST00000445629 235 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.54□□□□□ -2
SNRNP40Q96DI7 AP001324.2-201ENST00000461163 319 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 FAM92A1P2-202ENST00000504766 877 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 RBBP4P6-201ENST00000508098 202 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 AC008413.1-201ENST00000511864 177 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 AC117532.1-201ENST00000514638 323 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 RNA5SP112-201ENST00000515937 99 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 AP001646.1-201ENST00000527936 915 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 OR5AL2P-201ENST00000532185 920 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.54□□□□□ -2
SNRNP40Q96DI7 AL022154.1-201ENST00000604698 785 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 AC087752.4-201ENST00000605911 462 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SNRNP40Q96DI7 AL449363.1-201ENST00000617815 186 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 AL590808.1-201ENST00000618696 141 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.54□□□□□ -2
SNRNP40Q96DI7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
SNRNP40Q96DI7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.54□□□□□ -2
SNRNP40Q96DI7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SNRNP40Q96DI7 AC008264.2-201ENST00000610193 3731 ntBASIC2.54□□□□□ -2
SNRNP40Q96DI7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.53□□□□□ -2
SNRNP40Q96DI7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.53□□□□□ -2
SNRNP40Q96DI7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.53□□□□□ -2
SNRNP40Q96DI7 AL390237.1-201ENST00000404226 1415 ntBASIC2.53□□□□□ -2
SNRNP40Q96DI7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.53□□□□□ -2
SNRNP40Q96DI7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SNRNP40Q96DI7 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
SNRNP40Q96DI7 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
SNRNP40Q96DI7 RNU6-61P-201ENST00000365528 109 ntBASIC2.53□□□□□ -2
SNRNP40Q96DI7 U8.9-201ENST00000365667 134 ntBASIC2.53□□□□□ -2
SNRNP40Q96DI7 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
SNRNP40Q96DI7 SNORA70B-201ENST00000384210 135 ntBASIC2.53□□□□□ -2
SNRNP40Q96DI7 RNU6-1179P-201ENST00000384667 107 ntBASIC2.53□□□□□ -2
SNRNP40Q96DI7 SNORA26.7-201ENST00000391288 122 ntBASIC2.53□□□□□ -2
SNRNP40Q96DI7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.53□□□□□ -2
SNRNP40Q96DI7 AL139039.1-201ENST00000401900 692 ntBASIC2.53□□□□□ -2
SNRNP40Q96DI7 RNU6-1328P-201ENST00000410938 106 ntBASIC2.53□□□□□ -2
SNRNP40Q96DI7 Y_RNA.623-201ENST00000411128 95 ntBASIC2.53□□□□□ -2
SNRNP40Q96DI7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.53□□□□□ -2
SNRNP40Q96DI7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms