Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-CQ95604 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-CQ95604 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-CQ95604 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-CQ95604 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-CQ95604 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-CQ95604 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HLA-CQ95604 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-CQ95604 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-CQ95604 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-CQ95604 Y_RNA.71-201ENST00000362892 104 ntBASIC5.19□□□□□ -1.58
HLA-CQ95604 Y_RNA.101-201ENST00000363154 102 ntBASIC5.19□□□□□ -1.58
HLA-CQ95604 Y_RNA.218-201ENST00000364218 104 ntBASIC5.19□□□□□ -1.58
HLA-CQ95604 RNU1-59P-201ENST00000364829 162 ntBASIC5.19□□□□□ -1.58
HLA-CQ95604 RNU6-898P-201ENST00000365627 104 ntBASIC5.19□□□□□ -1.58
HLA-CQ95604 RNU6-381P-201ENST00000391259 108 ntBASIC5.19□□□□□ -1.58
HLA-CQ95604 AC114755.2-201ENST00000413520 361 ntBASIC5.19□□□□□ -1.58
HLA-CQ95604 RPEP3-201ENST00000425462 676 ntBASIC5.19□□□□□ -1.58
HLA-CQ95604 RPS15AP5-201ENST00000436276 388 ntBASIC5.19□□□□□ -1.58
HLA-CQ95604 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-CQ95604 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-CQ95604 snoU13.29-201ENST00000459370 104 ntBASIC5.19□□□□□ -1.58
HLA-CQ95604 RPL23AP56-201ENST00000460778 453 ntBASIC5.19□□□□□ -1.58
HLA-CQ95604 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-CQ95604 RNU6-155P-201ENST00000516347 100 ntBASIC5.19□□□□□ -1.58
HLA-CQ95604 CKS1BP7-201ENST00000522230 235 ntBASIC5.19□□□□□ -1.58
HLA-CQ95604 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-CQ95604 SNRPGP15-201ENST00000600149 222 ntBASIC5.19□□□□□ -1.58
HLA-CQ95604 AC004467.1-201ENST00000615678 330 ntBASIC5.19□□□□□ -1.58
HLA-CQ95604 AC092628.2-201ENST00000622492 339 ntBASIC5.19□□□□□ -1.58
HLA-CQ95604 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-CQ95604 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-CQ95604 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-CQ95604 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.19□□□□□ -1.58
HLA-CQ95604 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-CQ95604 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HLA-CQ95604 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-CQ95604 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-CQ95604 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-CQ95604 NOL8P1-201ENST00000508336 3529 ntBASIC5.18□□□□□ -1.58
HLA-CQ95604 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-CQ95604 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-CQ95604 OR56B2P-202ENST00000641377 2453 ntBASIC5.18□□□□□ -1.58
HLA-CQ95604 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-CQ95604 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-CQ95604 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-CQ95604 AC092681.1-201ENST00000297369 291 ntBASIC5.18□□□□□ -1.58
HLA-CQ95604 RNU6-1325P-201ENST00000364905 105 ntBASIC5.18□□□□□ -1.58
HLA-CQ95604 RNA5SP171-201ENST00000391071 115 ntBASIC5.18□□□□□ -1.58
HLA-CQ95604 RNU6-1199P-201ENST00000411249 104 ntBASIC5.18□□□□□ -1.58
HLA-CQ95604 AC138623.1-201ENST00000418060 216 ntBASIC5.18□□□□□ -1.58
HLA-CQ95604 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-CQ95604 H2AFZP5-201ENST00000446960 382 ntBASIC5.18□□□□□ -1.58
HLA-CQ95604 AC091179.1-201ENST00000461606 579 ntBASIC5.18□□□□□ -1.58
HLA-CQ95604 AC007215.1-201ENST00000464893 276 ntBASIC5.18□□□□□ -1.58
HLA-CQ95604 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-CQ95604 MIR3145-201ENST00000580727 82 ntBASIC5.18□□□□□ -1.58
HLA-CQ95604 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-CQ95604 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-CQ95604 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-CQ95604 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-CQ95604 AC010266.2-201ENST00000564741 3255 ntBASIC5.17□□□□□ -1.58
HLA-CQ95604 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-CQ95604 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-CQ95604 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-CQ95604 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
HLA-CQ95604 RNU1-108P-201ENST00000362556 161 ntBASIC5.17□□□□□ -1.58
HLA-CQ95604 SNORD56.1-201ENST00000362913 68 ntBASIC5.17□□□□□ -1.58
HLA-CQ95604 RNU1-140P-201ENST00000365040 165 ntBASIC5.17□□□□□ -1.58
HLA-CQ95604 RNU6-793P-201ENST00000384233 104 ntBASIC5.17□□□□□ -1.58
HLA-CQ95604 RNA5SP397-201ENST00000391323 118 ntBASIC5.17□□□□□ -1.58
HLA-CQ95604 AL035079.1-201ENST00000405210 287 ntBASIC5.17□□□□□ -1.58
HLA-CQ95604 EIF4A1P3-201ENST00000411521 244 ntBASIC5.17□□□□□ -1.58
HLA-CQ95604 AC079168.2-201ENST00000453977 416 ntBASIC5.17□□□□□ -1.58
HLA-CQ95604 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-CQ95604 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-CQ95604 RNU1-103P-201ENST00000516502 125 ntBASIC5.17□□□□□ -1.58
HLA-CQ95604 RNU6-971P-201ENST00000516920 106 ntBASIC5.17□□□□□ -1.58
HLA-CQ95604 MIR4744-201ENST00000581563 82 ntBASIC5.17□□□□□ -1.58
HLA-CQ95604 FTX_3.1-201ENST00000610451 147 ntBASIC5.17□□□□□ -1.58
HLA-CQ95604 FAM27B-201ENST00000610601 213 ntBASIC5.17□□□□□ -1.58
HLA-CQ95604 AC091932.3-201ENST00000624223 323 ntBASIC5.17□□□□□ -1.58
HLA-CQ95604 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-CQ95604 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-CQ95604 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-CQ95604 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
HLA-CQ95604 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HLA-CQ95604 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HLA-CQ95604 AC005005.4-201ENST00000623789 16698 ntBASIC5.17□□□□□ -1.58
HLA-CQ95604 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-CQ95604 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-CQ95604 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-CQ95604 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-CQ95604 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-CQ95604 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-CQ95604 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
HLA-CQ95604 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-CQ95604 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-CQ95604 RNU6-778P-201ENST00000363269 103 ntBASIC5.16□□□□□ -1.58
HLA-CQ95604 MIR487A-201ENST00000385009 80 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms