Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 SNORA31.3-201ENST00000516029 96 ntBASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 AP003355.3-201ENST00000623465 114 ntBASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 AC006386.2-201ENST00000624491 75 ntBASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 AC012005.1-201ENST00000624575 75 ntBASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LINC00116Q8NCU8 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 Y_RNA.152-201ENST00000363578 100 ntBASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 Y_RNA.307-201ENST00000365022 117 ntBASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 MIR153-1-201ENST00000384914 90 ntBASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 RNU6-837P-201ENST00000391056 108 ntBASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 MTHFD2P2-201ENST00000407725 247 ntBASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 AC011816.1-201ENST00000441346 546 ntBASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 PCMTD1P1-201ENST00000455560 355 ntBASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 AC104564.1-201ENST00000493028 407 ntBASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 AC114801.2-201ENST00000503825 781 ntBASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 MTND3P25-201ENST00000509243 135 ntBASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 RNU6-914P-201ENST00000516749 109 ntBASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 RNU6-388P-201ENST00000517012 105 ntBASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 RNU6-389P-201ENST00000517048 105 ntBASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 AP005902.1-201ENST00000521358 186 ntBASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 AL161713.1-201ENST00000555538 145 ntBASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 AL355297.3-201ENST00000604082 446 ntBASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 AC062037.2-201ENST00000610137 73 ntBASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 AL031601.2-202ENST00000622650 282 ntBASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LINC00116Q8NCU8 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 AC068254.2-201ENST00000623938 3577 ntBASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 Y_RNA.380-201ENST00000365663 111 ntBASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 RNU6-76P-201ENST00000384060 104 ntBASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 RNU6-882P-201ENST00000391025 103 ntBASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 AL158071.1-201ENST00000430315 461 ntBASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 AC105758.1-201ENST00000506038 399 ntBASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 Y_RNA.668-201ENST00000516233 93 ntBASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 SNORA31.22-201ENST00000517204 135 ntBASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 SUB1P3-201ENST00000564581 315 ntBASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 AC005951.2-201ENST00000576282 495 ntBASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 LARP7P3-201ENST00000579888 337 ntBASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 AC005357.1-201ENST00000588399 301 ntBASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 AL451007.1-201ENST00000595491 289 ntBASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LINC00116Q8NCU8 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 Y_RNA.210-201ENST00000364161 110 ntBASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 SNORD73A-201ENST00000386062 65 ntBASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 AL357075.1-201ENST00000404107 726 ntBASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 AC112492.4-201ENST00000456549 352 ntBASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 RPL22P13-201ENST00000493291 347 ntBASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 RNA5SP341-201ENST00000516261 117 ntBASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 AC131281.1-201ENST00000522984 164 ntBASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 AC022616.4-201ENST00000522985 181 ntBASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 AC022882.1-201ENST00000532142 501 ntBASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 AC107918.3-201ENST00000533272 382 ntBASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 SNRPGP16-201ENST00000533275 226 ntBASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 AC233702.9-201ENST00000581528 203 ntBASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 OR1M4P-201ENST00000589199 287 ntBASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 BDH2P1-201ENST00000602288 736 ntBASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 AL033523.1-201ENST00000605153 153 ntBASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 AC107871.2-201ENST00000612894 502 ntBASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.44□□□□□ -1.7
LINC00116Q8NCU8 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 OTUD4P1-201ENST00000237841 3067 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms