Protein–RNA interactions for Protein: Q15270

NKX1-1, NK1 transcription factor-related protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-1Q15270 AL034408.1-202ENST00000636088 415 ntBASIC6.14□□□□□ -1.43
NKX1-1Q15270 DLD-214ENST00000639772 421 ntTSL 5 BASIC6.14□□□□□ -1.43
NKX1-1Q15270 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NKX1-1Q15270 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.14□□□□□ -1.43
NKX1-1Q15270 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.14□□□□□ -1.43
NKX1-1Q15270 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
NKX1-1Q15270 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NKX1-1Q15270 SALL4P2-201ENST00000423288 2910 ntBASIC6.14□□□□□ -1.43
NKX1-1Q15270 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
NKX1-1Q15270 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NKX1-1Q15270 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NKX1-1Q15270 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NKX1-1Q15270 AC021146.4-201ENST00000309229 279 ntBASIC6.13□□□□□ -1.43
NKX1-1Q15270 RNU6-151P-201ENST00000364158 107 ntBASIC6.13□□□□□ -1.43
NKX1-1Q15270 MIR487A-201ENST00000385009 80 ntBASIC6.13□□□□□ -1.43
NKX1-1Q15270 SNORA40-201ENST00000388090 126 ntBASIC6.13□□□□□ -1.43
NKX1-1Q15270 MIR1193-201ENST00000408109 78 ntBASIC6.13□□□□□ -1.43
NKX1-1Q15270 AL356387.2-201ENST00000422272 243 ntBASIC6.13□□□□□ -1.43
NKX1-1Q15270 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC6.13□□□□□ -1.43
NKX1-1Q15270 RPL26P9-201ENST00000457466 433 ntBASIC6.13□□□□□ -1.43
NKX1-1Q15270 RPL7AP28-201ENST00000464513 571 ntBASIC6.13□□□□□ -1.43
NKX1-1Q15270 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NKX1-1Q15270 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC6.13□□□□□ -1.43
NKX1-1Q15270 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NKX1-1Q15270 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC6.13□□□□□ -1.43
NKX1-1Q15270 Y_RNA.797-201ENST00000515977 94 ntBASIC6.13□□□□□ -1.43
NKX1-1Q15270 MIR548X2-201ENST00000579776 100 ntBASIC6.13□□□□□ -1.43
NKX1-1Q15270 AL008718.3-201ENST00000610217 321 ntBASIC6.13□□□□□ -1.43
NKX1-1Q15270 U3.53-201ENST00000628922 216 ntBASIC6.13□□□□□ -1.43
NKX1-1Q15270 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC6.13□□□□□ -1.43
NKX1-1Q15270 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.13□□□□□ -1.43
NKX1-1Q15270 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NKX1-1Q15270 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
NKX1-1Q15270 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NKX1-1Q15270 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.13□□□□□ -1.43
NKX1-1Q15270 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC6.13□□□□□ -1.43
NKX1-1Q15270 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC6.12□□□□□ -1.43
NKX1-1Q15270 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC6.12□□□□□ -1.43
NKX1-1Q15270 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NKX1-1Q15270 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
NKX1-1Q15270 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NKX1-1Q15270 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NKX1-1Q15270 RNU6-275P-201ENST00000364910 107 ntBASIC6.12□□□□□ -1.43
NKX1-1Q15270 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NKX1-1Q15270 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC6.12□□□□□ -1.43
NKX1-1Q15270 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC6.12□□□□□ -1.43
NKX1-1Q15270 ANKRD30BP1-201ENST00000451052 2186 ntBASIC6.12□□□□□ -1.43
NKX1-1Q15270 snoU13.6-201ENST00000458785 104 ntBASIC6.12□□□□□ -1.43
NKX1-1Q15270 AC109327.1-201ENST00000471666 403 ntBASIC6.12□□□□□ -1.43
NKX1-1Q15270 SRI-210ENST00000490437 570 ntTSL 2 BASIC6.12□□□□□ -1.43
NKX1-1Q15270 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NKX1-1Q15270 RNU6-426P-201ENST00000516464 97 ntBASIC6.12□□□□□ -1.43
NKX1-1Q15270 SNORA31.23-201ENST00000517219 133 ntBASIC6.12□□□□□ -1.43
NKX1-1Q15270 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC6.12□□□□□ -1.43
NKX1-1Q15270 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC6.12□□□□□ -1.43
NKX1-1Q15270 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
NKX1-1Q15270 AC092628.2-201ENST00000622492 339 ntBASIC6.12□□□□□ -1.43
NKX1-1Q15270 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NKX1-1Q15270 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC6.12□□□□□ -1.43
NKX1-1Q15270 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NKX1-1Q15270 AC125336.1-201ENST00000508893 2827 ntBASIC6.12□□□□□ -1.43
NKX1-1Q15270 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NKX1-1Q15270 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.11□□□□□ -1.43
NKX1-1Q15270 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC6.11□□□□□ -1.43
NKX1-1Q15270 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NKX1-1Q15270 RNU1-62P-201ENST00000362599 164 ntBASIC6.11□□□□□ -1.43
NKX1-1Q15270 Y_RNA.101-201ENST00000363154 102 ntBASIC6.11□□□□□ -1.43
NKX1-1Q15270 SNORA36A-201ENST00000384221 132 ntBASIC6.11□□□□□ -1.43
NKX1-1Q15270 MIR659-201ENST00000384963 97 ntBASIC6.11□□□□□ -1.43
NKX1-1Q15270 FTH1P15-201ENST00000406984 280 ntBASIC6.11□□□□□ -1.43
NKX1-1Q15270 TRAPPC2P4-201ENST00000421750 331 ntBASIC6.11□□□□□ -1.43
NKX1-1Q15270 CR769767.1-201ENST00000436337 346 ntBASIC6.11□□□□□ -1.43
NKX1-1Q15270 NDUFB4P6-201ENST00000436819 366 ntBASIC6.11□□□□□ -1.43
NKX1-1Q15270 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC6.11□□□□□ -1.43
NKX1-1Q15270 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC6.11□□□□□ -1.43
NKX1-1Q15270 MIR3939-201ENST00000582614 106 ntBASIC6.11□□□□□ -1.43
NKX1-1Q15270 AC091932.3-201ENST00000624223 323 ntBASIC6.11□□□□□ -1.43
NKX1-1Q15270 MIR3674-201ENST00000636576 68 ntBASIC6.11□□□□□ -1.43
NKX1-1Q15270 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.11□□□□□ -1.43
NKX1-1Q15270 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.11□□□□□ -1.43
NKX1-1Q15270 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NKX1-1Q15270 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NKX1-1Q15270 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
NKX1-1Q15270 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NKX1-1Q15270 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
NKX1-1Q15270 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NKX1-1Q15270 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NKX1-1Q15270 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX1-1Q15270 MAPK10-328ENST00000641553 4009 ntBASIC6.1□□□□□ -1.43
NKX1-1Q15270 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX1-1Q15270 RNU6-1285P-201ENST00000363480 105 ntBASIC6.1□□□□□ -1.43
NKX1-1Q15270 RNU6-103P-201ENST00000363686 107 ntBASIC6.1□□□□□ -1.43
NKX1-1Q15270 RNU6-487P-201ENST00000365430 104 ntBASIC6.1□□□□□ -1.43
NKX1-1Q15270 RPL7AP25-201ENST00000423357 805 ntBASIC6.1□□□□□ -1.43
NKX1-1Q15270 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC6.1□□□□□ -1.43
NKX1-1Q15270 RPS15AP5-201ENST00000436276 388 ntBASIC6.1□□□□□ -1.43
NKX1-1Q15270 HMGB1P37-201ENST00000439613 609 ntBASIC6.1□□□□□ -1.43
NKX1-1Q15270 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC6.1□□□□□ -1.43
NKX1-1Q15270 RPL39P29-201ENST00000447779 157 ntBASIC6.1□□□□□ -1.43
NKX1-1Q15270 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms