Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.29□□□□□ -1.72
ERVFC1P60507 AC010469.1-201ENST00000463864 576 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 AC098869.1-201ENST00000481627 292 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.29□□□□□ -1.72
ERVFC1P60507 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.29□□□□□ -1.72
ERVFC1P60507 RNU1-95P-201ENST00000516357 160 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 RNU1-128P-201ENST00000516704 160 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 RPL23AP87-202ENST00000573039 466 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 AC025627.2-201ENST00000576220 160 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 AL121917.1-203ENST00000605534 577 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 BX284668.6-201ENST00000606899 438 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 RMST_4.1-201ENST00000616886 107 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 AC127459.3-201ENST00000624328 466 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.29□□□□□ -1.72
ERVFC1P60507 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.29□□□□□ -1.72
ERVFC1P60507 AC243829.7-201ENST00000633081 225 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 AC009093.8-201ENST00000641769 292 ntBASIC4.29□□□□□ -1.72
ERVFC1P60507 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ERVFC1P60507 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
ERVFC1P60507 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ERVFC1P60507 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ERVFC1P60507 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.29□□□□□ -1.72
ERVFC1P60507 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.29□□□□□ -1.72
ERVFC1P60507 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ERVFC1P60507 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ERVFC1P60507 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ERVFC1P60507 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ERVFC1P60507 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.29□□□□□ -1.72
ERVFC1P60507 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ERVFC1P60507 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.28□□□□□ -1.72
ERVFC1P60507 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.28□□□□□ -1.72
ERVFC1P60507 RNA5SP52-201ENST00000362448 134 ntBASIC4.28□□□□□ -1.72
ERVFC1P60507 Y_RNA.27-201ENST00000362540 103 ntBASIC4.28□□□□□ -1.72
ERVFC1P60507 RNU6-774P-201ENST00000363238 107 ntBASIC4.28□□□□□ -1.72
ERVFC1P60507 RNU6-378P-201ENST00000384324 107 ntBASIC4.28□□□□□ -1.72
ERVFC1P60507 MIR124-3-201ENST00000384866 87 ntBASIC4.28□□□□□ -1.72
ERVFC1P60507 RNU2-43P-201ENST00000410306 190 ntBASIC4.28□□□□□ -1.72
ERVFC1P60507 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ERVFC1P60507 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.28□□□□□ -1.72
ERVFC1P60507 AC069285.2-201ENST00000440210 275 ntBASIC4.28□□□□□ -1.72
ERVFC1P60507 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.28□□□□□ -1.72
ERVFC1P60507 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ERVFC1P60507 AL136097.1-201ENST00000456945 913 ntBASIC4.28□□□□□ -1.72
ERVFC1P60507 RNU6-1037P-201ENST00000459571 107 ntBASIC4.28□□□□□ -1.72
ERVFC1P60507 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.28□□□□□ -1.72
ERVFC1P60507 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.28□□□□□ -1.72
ERVFC1P60507 AC067942.3-201ENST00000512025 362 ntBASIC4.28□□□□□ -1.72
ERVFC1P60507 IGKV2-23-201ENST00000518729 323 ntBASIC4.28□□□□□ -1.72
ERVFC1P60507 AC026403.1-201ENST00000518938 295 ntBASIC4.28□□□□□ -1.72
ERVFC1P60507 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.28□□□□□ -1.72
ERVFC1P60507 CYCSP30-201ENST00000546447 172 ntBASIC4.28□□□□□ -1.72
ERVFC1P60507 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.28□□□□□ -1.72
ERVFC1P60507 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.28□□□□□ -1.72
ERVFC1P60507 AC007179.3-201ENST00000604976 235 ntBASIC4.28□□□□□ -1.72
ERVFC1P60507 MIR3976-201ENST00000606807 139 ntBASIC4.28□□□□□ -1.72
ERVFC1P60507 AC012314.7-201ENST00000619693 93 ntBASIC4.28□□□□□ -1.72
ERVFC1P60507 SNORD39.4-201ENST00000620099 78 ntBASIC4.28□□□□□ -1.72
ERVFC1P60507 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.28□□□□□ -1.72
ERVFC1P60507 AL034408.1-202ENST00000636088 415 ntBASIC4.28□□□□□ -1.72
ERVFC1P60507 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
ERVFC1P60507 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
ERVFC1P60507 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
ERVFC1P60507 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ERVFC1P60507 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.28□□□□□ -1.73
ERVFC1P60507 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ERVFC1P60507 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
ERVFC1P60507 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.27□□□□□ -1.73
ERVFC1P60507 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ERVFC1P60507 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
ERVFC1P60507 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ERVFC1P60507 RNA5SP22-201ENST00000365393 109 ntBASIC4.27□□□□□ -1.73
ERVFC1P60507 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.27□□□□□ -1.73
ERVFC1P60507 SNORD96B-201ENST00000386148 79 ntBASIC4.27□□□□□ -1.73
ERVFC1P60507 SNORD115-46-201ENST00000390982 71 ntBASIC4.27□□□□□ -1.73
ERVFC1P60507 RNU6-700P-201ENST00000391043 107 ntBASIC4.27□□□□□ -1.73
ERVFC1P60507 HSPE1P8-201ENST00000406997 288 ntBASIC4.27□□□□□ -1.73
ERVFC1P60507 AL603910.2-201ENST00000407268 136 ntBASIC4.27□□□□□ -1.73
ERVFC1P60507 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.27□□□□□ -1.73
ERVFC1P60507 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.27□□□□□ -1.73
ERVFC1P60507 AC092423.1-201ENST00000430165 186 ntBASIC4.27□□□□□ -1.73
ERVFC1P60507 HMGB1P27-201ENST00000431429 603 ntBASIC4.27□□□□□ -1.73
ERVFC1P60507 AC133134.1-201ENST00000466800 359 ntBASIC4.27□□□□□ -1.73
ERVFC1P60507 HMGN2P13-201ENST00000476476 274 ntBASIC4.27□□□□□ -1.73
ERVFC1P60507 VWA8P1-201ENST00000510889 176 ntBASIC4.27□□□□□ -1.73
ERVFC1P60507 AC074250.1-201ENST00000511117 192 ntBASIC4.27□□□□□ -1.73
ERVFC1P60507 RNA5SP179-201ENST00000517284 121 ntBASIC4.27□□□□□ -1.73
ERVFC1P60507 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.27□□□□□ -1.73
ERVFC1P60507 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.27□□□□□ -1.73
ERVFC1P60507 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.27□□□□□ -1.73
ERVFC1P60507 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.27□□□□□ -1.73
ERVFC1P60507 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.27□□□□□ -1.73
ERVFC1P60507 BDH2P1-201ENST00000602288 736 ntBASIC4.27□□□□□ -1.73
ERVFC1P60507 SRGNP1-201ENST00000603392 451 ntBASIC4.27□□□□□ -1.73
ERVFC1P60507 AC091167.4-201ENST00000605079 184 ntBASIC4.27□□□□□ -1.73
ERVFC1P60507 AC005086.4-201ENST00000623065 213 ntBASIC4.27□□□□□ -1.73
ERVFC1P60507 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
ERVFC1P60507 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ERVFC1P60507 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.27□□□□□ -1.73
ERVFC1P60507 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ERVFC1P60507 Z82217.1-201ENST00000625157 8149 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms