Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC5.78□□□□□ -1.48
NUBP1P53384 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.78□□□□□ -1.48
NUBP1P53384 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.78□□□□□ -1.48
NUBP1P53384 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.78□□□□□ -1.48
NUBP1P53384 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.78□□□□□ -1.48
NUBP1P53384 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.78□□□□□ -1.48
NUBP1P53384 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUBP1P53384 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUBP1P53384 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NUBP1P53384 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
NUBP1P53384 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUBP1P53384 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NUBP1P53384 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
NUBP1P53384 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.77□□□□□ -1.49
NUBP1P53384 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUBP1P53384 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUBP1P53384 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUBP1P53384 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.77□□□□□ -1.49
NUBP1P53384 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUBP1P53384 SNORA67-201ENST00000384423 137 ntBASIC5.77□□□□□ -1.49
NUBP1P53384 RNU6-1152P-201ENST00000384576 107 ntBASIC5.77□□□□□ -1.49
NUBP1P53384 RNY1P7-201ENST00000384743 110 ntBASIC5.77□□□□□ -1.49
NUBP1P53384 Z98745.1-201ENST00000402553 494 ntBASIC5.77□□□□□ -1.49
NUBP1P53384 AL133475.1-201ENST00000404414 305 ntBASIC5.77□□□□□ -1.49
NUBP1P53384 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.77□□□□□ -1.49
NUBP1P53384 RPL23AP97-201ENST00000568955 471 ntBASIC5.77□□□□□ -1.49
NUBP1P53384 RPL23AP91-201ENST00000569211 455 ntBASIC5.77□□□□□ -1.49
NUBP1P53384 RN7SL52P-201ENST00000584271 284 ntBASIC5.77□□□□□ -1.49
NUBP1P53384 RN7SL722P-201ENST00000617780 284 ntBASIC5.77□□□□□ -1.49
NUBP1P53384 RN7SL565P-201ENST00000618246 284 ntBASIC5.77□□□□□ -1.49
NUBP1P53384 AC134878.1-201ENST00000619901 243 ntBASIC5.77□□□□□ -1.49
NUBP1P53384 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NUBP1P53384 AC103988.1-201ENST00000566382 2177 ntBASIC5.77□□□□□ -1.49
NUBP1P53384 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUBP1P53384 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.77□□□□□ -1.49
NUBP1P53384 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.76□□□□□ -1.49
NUBP1P53384 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.76□□□□□ -1.49
NUBP1P53384 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.76□□□□□ -1.49
NUBP1P53384 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.76□□□□□ -1.49
NUBP1P53384 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.76□□□□□ -1.49
NUBP1P53384 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUBP1P53384 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.76□□□□□ -1.49
NUBP1P53384 MAPK10-344ENST00000641718 3746 ntBASIC5.76□□□□□ -1.49
NUBP1P53384 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.76□□□□□ -1.49
NUBP1P53384 AC144833.1-201ENST00000567953 4089 ntBASIC5.76□□□□□ -1.49
NUBP1P53384 MIR133A2-201ENST00000347538 102 ntBASIC5.76□□□□□ -1.49
NUBP1P53384 AL159987.1-201ENST00000347911 293 ntBASIC5.76□□□□□ -1.49
NUBP1P53384 SNORA51.4-201ENST00000364993 124 ntBASIC5.76□□□□□ -1.49
NUBP1P53384 U3.15-201ENST00000365398 212 ntBASIC5.76□□□□□ -1.49
NUBP1P53384 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.76□□□□□ -1.49
NUBP1P53384 RN7SL352P-201ENST00000466002 277 ntBASIC5.76□□□□□ -1.49
NUBP1P53384 RNU6ATAC17P-201ENST00000516074 71 ntBASIC5.76□□□□□ -1.49
NUBP1P53384 RNU6-158P-201ENST00000517104 100 ntBASIC5.76□□□□□ -1.49
NUBP1P53384 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.76□□□□□ -1.49
NUBP1P53384 AC024220.1-201ENST00000603675 484 ntBASIC5.76□□□□□ -1.49
NUBP1P53384 Pinc.1-201ENST00000616452 154 ntBASIC5.76□□□□□ -1.49
NUBP1P53384 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC5.76□□□□□ -1.49
NUBP1P53384 AC074101.1-201ENST00000637861 241 ntBASIC5.76□□□□□ -1.49
NUBP1P53384 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC5.76□□□□□ -1.49
NUBP1P53384 LCOR-201ENST00000286067 4542 ntBASIC5.76□□□□□ -1.49
NUBP1P53384 AL136531.3-201ENST00000624378 3658 ntBASIC5.76□□□□□ -1.49
NUBP1P53384 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUBP1P53384 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUBP1P53384 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUBP1P53384 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
NUBP1P53384 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUBP1P53384 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUBP1P53384 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
NUBP1P53384 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
NUBP1P53384 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.75□□□□□ -1.49
NUBP1P53384 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NUBP1P53384 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NUBP1P53384 MIR181A2-201ENST00000384863 110 ntBASIC5.75□□□□□ -1.49
NUBP1P53384 RNU1-77P-201ENST00000390868 162 ntBASIC5.75□□□□□ -1.49
NUBP1P53384 RNU6-592P-201ENST00000411333 103 ntBASIC5.75□□□□□ -1.49
NUBP1P53384 AL590139.1-201ENST00000416267 400 ntBASIC5.75□□□□□ -1.49
NUBP1P53384 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC5.75□□□□□ -1.49
NUBP1P53384 AC023141.8-201ENST00000442554 208 ntBASIC5.75□□□□□ -1.49
NUBP1P53384 RBMY2UP-201ENST00000453474 324 ntBASIC5.75□□□□□ -1.49
NUBP1P53384 RPS29P33-201ENST00000456717 146 ntBASIC5.75□□□□□ -1.49
NUBP1P53384 AC021205.2-201ENST00000480069 347 ntBASIC5.75□□□□□ -1.49
NUBP1P53384 RN7SL817P-201ENST00000480777 288 ntBASIC5.75□□□□□ -1.49
NUBP1P53384 RNU6-928P-201ENST00000516876 104 ntBASIC5.75□□□□□ -1.49
NUBP1P53384 RNU6-365P-201ENST00000517113 106 ntBASIC5.75□□□□□ -1.49
NUBP1P53384 AC126615.2-201ENST00000553003 515 ntBASIC5.75□□□□□ -1.49
NUBP1P53384 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.75□□□□□ -1.49
NUBP1P53384 SNORD115-40-201ENST00000606510 82 ntBASIC5.75□□□□□ -1.49
NUBP1P53384 AP005432.2-201ENST00000608162 586 ntBASIC5.75□□□□□ -1.49
NUBP1P53384 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC5.75□□□□□ -1.49
NUBP1P53384 AC090607.5-201ENST00000615692 224 ntBASIC5.75□□□□□ -1.49
NUBP1P53384 AC073308.1-201ENST00000623696 305 ntBASIC5.75□□□□□ -1.49
NUBP1P53384 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NUBP1P53384 AL136360.1-201ENST00000503377 1900 ntBASIC5.75□□□□□ -1.49
NUBP1P53384 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.75□□□□□ -1.49
NUBP1P53384 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.75□□□□□ -1.49
NUBP1P53384 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NUBP1P53384 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NUBP1P53384 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NUBP1P53384 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
NUBP1P53384 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms