Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.08□□□□□ -1.44
CD44P16070 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CD44P16070 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CD44P16070 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CD44P16070 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CD44P16070 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC6.07□□□□□ -1.44
CD44P16070 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.07□□□□□ -1.44
CD44P16070 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD44P16070 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CD44P16070 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC6.07□□□□□ -1.44
CD44P16070 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD44P16070 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD44P16070 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CD44P16070 RN7SKP187-201ENST00000365536 330 ntBASIC6.07□□□□□ -1.44
CD44P16070 RN7SL741P-201ENST00000482473 289 ntBASIC6.07□□□□□ -1.44
CD44P16070 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.07□□□□□ -1.44
CD44P16070 RNU6-240P-201ENST00000516098 97 ntBASIC6.07□□□□□ -1.44
CD44P16070 RNA5SP271-201ENST00000516700 88 ntBASIC6.07□□□□□ -1.44
CD44P16070 AL451007.1-201ENST00000595491 289 ntBASIC6.07□□□□□ -1.44
CD44P16070 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.07□□□□□ -1.44
CD44P16070 AL591034.3-201ENST00000605511 685 ntBASIC6.07□□□□□ -1.44
CD44P16070 AC012531.4-201ENST00000616509 177 ntBASIC6.07□□□□□ -1.44
CD44P16070 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CD44P16070 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CD44P16070 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD44P16070 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC6.07□□□□□ -1.44
CD44P16070 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CD44P16070 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CD44P16070 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CD44P16070 MARK2P15-201ENST00000432204 2186 ntBASIC6.07□□□□□ -1.44
CD44P16070 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD44P16070 AL672167.1-205ENST00000641112 3080 ntBASIC6.07□□□□□ -1.44
CD44P16070 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD44P16070 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD44P16070 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CD44P16070 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD44P16070 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD44P16070 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CD44P16070 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD44P16070 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD44P16070 Y_RNA.66-201ENST00000362862 102 ntBASIC6.06□□□□□ -1.44
CD44P16070 Y_RNA.190-201ENST00000363964 101 ntBASIC6.06□□□□□ -1.44
CD44P16070 RN7SKP69-201ENST00000365390 305 ntBASIC6.06□□□□□ -1.44
CD44P16070 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CD44P16070 MIR1912-201ENST00000410389 80 ntBASIC6.06□□□□□ -1.44
CD44P16070 BTF3P4-201ENST00000418852 495 ntBASIC6.06□□□□□ -1.44
CD44P16070 AC113412.1-201ENST00000425840 504 ntBASIC6.06□□□□□ -1.44
CD44P16070 RPL23AP82-202ENST00000427528 469 ntBASIC6.06□□□□□ -1.44
CD44P16070 NDUFB1P1-201ENST00000435191 180 ntBASIC6.06□□□□□ -1.44
CD44P16070 RPL23AP7-203ENST00000449021 469 ntBASIC6.06□□□□□ -1.44
CD44P16070 CENPBD1P1-201ENST00000464061 469 ntBASIC6.06□□□□□ -1.44
CD44P16070 RPSAP50-201ENST00000481955 852 ntBASIC6.06□□□□□ -1.44
CD44P16070 RNU6-795P-201ENST00000516323 103 ntBASIC6.06□□□□□ -1.44
CD44P16070 RNU6ATAC12P-201ENST00000516542 115 ntBASIC6.06□□□□□ -1.44
CD44P16070 RN7SKP209-201ENST00000516888 304 ntBASIC6.06□□□□□ -1.44
CD44P16070 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC6.06□□□□□ -1.44
CD44P16070 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.06□□□□□ -1.44
CD44P16070 MRPS21P7-201ENST00000566937 238 ntBASIC6.06□□□□□ -1.44
CD44P16070 MIR6071-201ENST00000616741 78 ntBASIC6.06□□□□□ -1.44
CD44P16070 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CD44P16070 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.06□□□□□ -1.44
CD44P16070 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD44P16070 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD44P16070 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
CD44P16070 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD44P16070 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD44P16070 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
CD44P16070 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CD44P16070 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD44P16070 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD44P16070 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.06□□□□□ -1.44
CD44P16070 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CD44P16070 ZNF137P-201ENST00000456718 1920 ntBASIC6.05□□□□□ -1.44
CD44P16070 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD44P16070 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CD44P16070 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC6.05□□□□□ -1.44
CD44P16070 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD44P16070 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC6.05□□□□□ -1.44
CD44P16070 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD44P16070 FTH1P15-201ENST00000406984 280 ntBASIC6.05□□□□□ -1.44
CD44P16070 Y_RNA.620-201ENST00000411009 88 ntBASIC6.05□□□□□ -1.44
CD44P16070 NME1P1-201ENST00000420914 382 ntBASIC6.05□□□□□ -1.44
CD44P16070 SNRPEP9-201ENST00000436794 238 ntBASIC6.05□□□□□ -1.44
CD44P16070 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.05□□□□□ -1.44
CD44P16070 RN7SL168P-201ENST00000463821 279 ntBASIC6.05□□□□□ -1.44
CD44P16070 RNU6-1149P-201ENST00000516810 97 ntBASIC6.05□□□□□ -1.44
CD44P16070 RN7SL290P-201ENST00000578661 300 ntBASIC6.05□□□□□ -1.44
CD44P16070 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC6.05□□□□□ -1.44
CD44P16070 AC132068.1-201ENST00000623805 459 ntBASIC6.05□□□□□ -1.44
CD44P16070 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
CD44P16070 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
CD44P16070 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD44P16070 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD44P16070 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CD44P16070 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD44P16070 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD44P16070 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD44P16070 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CD44P16070 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
CD44P16070 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms