Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DQA1P01909 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DQA1P01909 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
HLA-DQA1P01909 OR5J1P-201ENST00000313544 939 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 RNA5SP138-201ENST00000365098 114 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 RNU6-1280P-201ENST00000365211 107 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 RNU6-190P-201ENST00000384154 102 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 RNU6-166P-201ENST00000384371 107 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 MIR518D-201ENST00000385014 87 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
HLA-DQA1P01909 AL591416.1-201ENST00000404015 867 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 Y_RNA.598-201ENST00000410480 95 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.73□□□□□ -2.13
HLA-DQA1P01909 AL365203.2-201ENST00000423444 196 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DQA1P01909 FABP5P14-201ENST00000437273 393 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DQA1P01909 PGBD4P3-201ENST00000440731 581 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.73□□□□□ -2.13
HLA-DQA1P01909 AP001324.2-201ENST00000461163 319 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.73□□□□□ -2.13
HLA-DQA1P01909 AC116655.1-201ENST00000508324 901 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DQA1P01909 SNORA25.11-201ENST00000515935 105 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 Y_RNA.672-201ENST00000516289 104 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 SCARNA3-201ENST00000517097 143 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.73□□□□□ -2.13
HLA-DQA1P01909 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DQA1P01909 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.73□□□□□ -2.13
HLA-DQA1P01909 AL157871.3-201ENST00000557231 293 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DQA1P01909 AC009127.3-201ENST00000570531 403 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 MIR4765-201ENST00000585007 77 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 AC005771.1-201ENST00000585581 349 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.73□□□□□ -2.13
HLA-DQA1P01909 RPS15AP11-201ENST00000594193 385 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 APOOP1-201ENST00000604695 592 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 AL158032.1-201ENST00000605401 106 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 AC126118.1-201ENST00000607744 628 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 AC063944.3-201ENST00000609969 533 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 MIR6840-201ENST00000611937 71 ntBASIC1.73□□□□□ -2.13
HLA-DQA1P01909 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
HLA-DQA1P01909 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.73□□□□□ -2.13
HLA-DQA1P01909 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DQA1P01909 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DQA1P01909 CDC27P3-201ENST00000635418 1910 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AC073343.1-201ENST00000328239 651 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 U8.3-201ENST00000363321 132 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 MIR34A-201ENST00000385130 110 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 RPL23AP32-201ENST00000395315 459 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AL133475.1-201ENST00000404414 305 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 RNU2-40P-201ENST00000410833 196 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 ELOCP4-201ENST00000420090 333 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 CYCSP46-201ENST00000423569 204 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 PTGES3P4-201ENST00000426243 356 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AC063976.3-201ENST00000426849 329 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AC137499.1-201ENST00000427602 88 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 RPL30P4-201ENST00000429309 333 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 MYL8P-204ENST00000431574 518 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 MICF-203ENST00000432679 129 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AC104850.1-201ENST00000435940 476 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 RPS15AP9-201ENST00000439856 381 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AP000936.2-201ENST00000447151 681 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AC025033.1-201ENST00000463883 194 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 MTCO2P29-201ENST00000465212 189 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AC090515.1-201ENST00000465295 476 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AC011005.2-201ENST00000487324 359 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 MTND1P22-201ENST00000510572 951 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 RNA5SP356-201ENST00000515972 94 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 RN7SKP132-201ENST00000516001 208 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 RNA5SP364-201ENST00000516938 78 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AC022616.3-201ENST00000523940 148 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AC010186.2-204ENST00000537668 439 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.72□□□□□ -2.13
HLA-DQA1P01909 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.72□□□□□ -2.13
HLA-DQA1P01909 MIR3616-201ENST00000584070 92 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AL451064.1-201ENST00000607718 471 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.72□□□□□ -2.13
HLA-DQA1P01909 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AC024940.5-201ENST00000622889 474 ntBASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HLA-DQA1P01909 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
HLA-DQA1P01909 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.72□□□□□ -2.13
HLA-DQA1P01909 AL109809.4-201ENST00000603520 2185 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 TEX21P-201ENST00000447107 1476 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HLA-DQA1P01909 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 Y_RNA.33-201ENST00000362591 102 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 Y_RNA.169-201ENST00000363745 96 ntBASIC1.71□□□□□ -2.14
HLA-DQA1P01909 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms