Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.37□□□□□ -1.71
SRGAP3O43295 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SRGAP3O43295 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.36□□□□□ -1.71
SRGAP3O43295 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.36□□□□□ -1.71
SRGAP3O43295 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.36□□□□□ -1.71
SRGAP3O43295 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.36□□□□□ -1.71
SRGAP3O43295 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SRGAP3O43295 Y_RNA.39-201ENST00000362620 98 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.36□□□□□ -1.71
SRGAP3O43295 Y_RNA.424-201ENST00000384063 103 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 RNU6-823P-201ENST00000391042 103 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 RNU2-23P-201ENST00000410545 195 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 RNU6-55P-201ENST00000411092 107 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 AC093578.1-201ENST00000415219 368 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.36□□□□□ -1.71
SRGAP3O43295 MRPS18CP6-201ENST00000423587 223 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 AL160275.3-201ENST00000423876 471 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 AL591212.2-201ENST00000433923 257 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 RPS20P1-201ENST00000434853 354 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 RPL23AP33-201ENST00000442301 452 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.36□□□□□ -1.71
SRGAP3O43295 AL583843.1-201ENST00000456070 346 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 AC107222.1-201ENST00000510899 637 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 AC104136.1-201ENST00000512969 394 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 RNU2-27P-201ENST00000516185 142 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 RNU6-840P-201ENST00000517275 65 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 AC007458.1-201ENST00000542812 373 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 AC109446.1-201ENST00000566172 220 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 AC005899.2-201ENST00000584353 90 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.36□□□□□ -1.71
SRGAP3O43295 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.36□□□□□ -1.71
SRGAP3O43295 AC012669.1-201ENST00000603209 283 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 MIR6075-201ENST00000620782 95 ntBASIC4.36□□□□□ -1.71
SRGAP3O43295 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SRGAP3O43295 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SRGAP3O43295 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SRGAP3O43295 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SRGAP3O43295 AC068647.1-201ENST00000489539 2265 ntBASIC4.35□□□□□ -1.71
SRGAP3O43295 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SRGAP3O43295 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SRGAP3O43295 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SRGAP3O43295 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.35□□□□□ -1.71
SRGAP3O43295 RNA5SP235-201ENST00000365411 114 ntBASIC4.35□□□□□ -1.71
SRGAP3O43295 MIR517A-201ENST00000385001 87 ntBASIC4.35□□□□□ -1.71
SRGAP3O43295 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SRGAP3O43295 RNU6-1109P-201ENST00000391187 107 ntBASIC4.35□□□□□ -1.71
SRGAP3O43295 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.35□□□□□ -1.71
SRGAP3O43295 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.35□□□□□ -1.71
SRGAP3O43295 RPL12P46-201ENST00000436610 195 ntBASIC4.35□□□□□ -1.71
SRGAP3O43295 RNU7-187P-201ENST00000458985 68 ntBASIC4.35□□□□□ -1.71
SRGAP3O43295 RPL9P32-201ENST00000464118 620 ntBASIC4.35□□□□□ -1.71
SRGAP3O43295 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.35□□□□□ -1.71
SRGAP3O43295 AC114801.2-201ENST00000503825 781 ntBASIC4.35□□□□□ -1.71
SRGAP3O43295 SLC25A15P5-201ENST00000508033 253 ntBASIC4.35□□□□□ -1.71
SRGAP3O43295 AC092436.3-201ENST00000511788 257 ntBASIC4.35□□□□□ -1.71
SRGAP3O43295 AC026333.2-201ENST00000542164 106 ntBASIC4.35□□□□□ -1.71
SRGAP3O43295 AC005357.1-201ENST00000588399 301 ntBASIC4.35□□□□□ -1.71
SRGAP3O43295 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.35□□□□□ -1.71
SRGAP3O43295 AC062037.2-201ENST00000610137 73 ntBASIC4.35□□□□□ -1.71
SRGAP3O43295 HMGB1P24-202ENST00000615653 685 ntBASIC4.35□□□□□ -1.71
SRGAP3O43295 AL391261.4-201ENST00000616012 481 ntBASIC4.35□□□□□ -1.71
SRGAP3O43295 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
SRGAP3O43295 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SRGAP3O43295 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SRGAP3O43295 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.35□□□□□ -1.71
SRGAP3O43295 AC106871.1-201ENST00000568324 3102 ntBASIC4.35□□□□□ -1.71
SRGAP3O43295 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SRGAP3O43295 CEP170P1-201ENST00000502249 4587 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.34□□□□□ -1.71
SRGAP3O43295 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SRGAP3O43295 RNU4-35P-201ENST00000362588 141 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 MIR490-201ENST00000384865 128 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 SNORD17-201ENST00000390930 237 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.34□□□□□ -1.71
SRGAP3O43295 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.34□□□□□ -1.71
SRGAP3O43295 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.34□□□□□ -1.71
SRGAP3O43295 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SRGAP3O43295 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.34□□□□□ -1.71
SRGAP3O43295 AC099799.1-201ENST00000439809 192 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.34□□□□□ -1.71
SRGAP3O43295 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.34□□□□□ -1.71
SRGAP3O43295 AL353752.1-201ENST00000454946 260 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 RNU6-953P-201ENST00000459154 107 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 RN7SL293P-201ENST00000481765 281 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 AC068781.1-201ENST00000488231 618 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 AC018437.1-201ENST00000492214 406 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 Y_RNA.668-201ENST00000516233 93 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 RNU4-77P-201ENST00000516692 156 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 RN7SKP234-201ENST00000517173 224 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 AC131281.1-201ENST00000522984 164 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 AC104576.1-201ENST00000524225 88 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 AC008739.3-201ENST00000603262 127 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 ELOCP5-201ENST00000604924 333 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 SNORD58B-201ENST00000607313 66 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 AL606534.2-204ENST00000635008 178 ntBASIC4.34□□□□□ -1.71
SRGAP3O43295 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SRGAP3O43295 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SRGAP3O43295 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms