Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 Y_RNA.646-201ENST00000410980 101 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 SNORA57.3-201ENST00000411095 141 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 RNU6-325P-201ENST00000411132 105 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 RNA5SP31-201ENST00000411144 127 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 Z99755.1-201ENST00000414048 380 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 RPL23AP82-202ENST00000427528 469 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 AC005534.2-201ENST00000431047 433 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 AC236972.1-201ENST00000433225 199 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 AC083863.1-201ENST00000438811 231 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 AC098831.1-201ENST00000440661 216 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 PCMTD1P1-201ENST00000455560 355 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 HMGN2P7-201ENST00000456186 273 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 RNU7-152P-201ENST00000458982 64 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 RN7SL542P-201ENST00000467147 294 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 RPL32P34-201ENST00000486380 400 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 MTCYBP40-201ENST00000509390 1135 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 AC093303.1-201ENST00000514549 295 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 Y_RNA.708-201ENST00000516950 96 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 AP000867.2-201ENST00000532468 320 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 AC107016.1-201ENST00000550463 337 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 AC103996.1-201ENST00000555468 102 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 AL360157.1-201ENST00000565962 87 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 AP000787.2-201ENST00000604432 568 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 AL157817.1-201ENST00000614264 790 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 IDE-202ENST00000371581 4480 ntTSL 2 BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
IGHV4-28A0A0C4DH34 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 RNU6-428P-201ENST00000362942 107 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 Y_RNA.146-201ENST00000363549 102 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 Y_RNA.404-201ENST00000383978 102 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 RNU6-790P-201ENST00000384479 105 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 RNU6-1106P-201ENST00000390845 107 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 U3.37-201ENST00000408528 213 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 RN7SKP156-201ENST00000410308 342 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 RNA5SP38-201ENST00000410750 119 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 NDUFS5P4-201ENST00000412983 318 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 AL117339.3-201ENST00000418733 162 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 RPL31P12-201ENST00000422587 358 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 AC006946.1-201ENST00000429106 328 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 AL445584.1-201ENST00000431451 330 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 ELOCP24-201ENST00000456370 334 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 SNORD5.1-201ENST00000458800 75 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 AC128713.1-201ENST00000471495 306 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 AC022695.1-201ENST00000522089 237 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 AC009314.1-201ENST00000603871 304 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 ZNF962P-201ENST00000443465 3140 ntBASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
IGHV4-28A0A0C4DH34 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
IGHV4-28A0A0C4DH34 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
IGHV4-28A0A0C4DH34 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
IGHV4-28A0A0C4DH34 OTUD4P1-201ENST00000237841 3067 ntBASIC2.78□□□□□ -1.96
IGHV4-28A0A0C4DH34 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC2.78□□□□□ -1.96
IGHV4-28A0A0C4DH34 RNU6-78P-201ENST00000362897 107 ntBASIC2.78□□□□□ -1.96
IGHV4-28A0A0C4DH34 Y_RNA.132-201ENST00000363421 102 ntBASIC2.78□□□□□ -1.96
IGHV4-28A0A0C4DH34 Y_RNA.187-201ENST00000363918 113 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms