Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.59□□□□□ -1.35
RNF39Q9H2S5 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RNF39Q9H2S5 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RNF39Q9H2S5 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF39Q9H2S5 FAM35DP-201ENST00000323387 2712 ntBASIC6.59□□□□□ -1.35
RNF39Q9H2S5 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.59□□□□□ -1.35
RNF39Q9H2S5 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF39Q9H2S5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
RNF39Q9H2S5 LCOR-201ENST00000286067 4542 ntBASIC6.59□□□□□ -1.35
RNF39Q9H2S5 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
RNF39Q9H2S5 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RNF39Q9H2S5 RNU105B-201ENST00000364478 208 ntBASIC6.59□□□□□ -1.35
RNF39Q9H2S5 SNORA25.9-201ENST00000365087 128 ntBASIC6.59□□□□□ -1.35
RNF39Q9H2S5 MIR34C-201ENST00000384831 77 ntBASIC6.59□□□□□ -1.35
RNF39Q9H2S5 AL627390.1-201ENST00000396055 340 ntBASIC6.59□□□□□ -1.35
RNF39Q9H2S5 SNORA11B-201ENST00000408175 129 ntBASIC6.59□□□□□ -1.35
RNF39Q9H2S5 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.59□□□□□ -1.35
RNF39Q9H2S5 RPL12P12-201ENST00000424633 501 ntBASIC6.59□□□□□ -1.35
RNF39Q9H2S5 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.59□□□□□ -1.35
RNF39Q9H2S5 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF39Q9H2S5 ACA64.1-201ENST00000459171 127 ntBASIC6.59□□□□□ -1.35
RNF39Q9H2S5 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC6.59□□□□□ -1.35
RNF39Q9H2S5 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.59□□□□□ -1.35
RNF39Q9H2S5 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.59□□□□□ -1.35
RNF39Q9H2S5 MIR6793-201ENST00000612376 63 ntBASIC6.59□□□□□ -1.35
RNF39Q9H2S5 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.59□□□□□ -1.35
RNF39Q9H2S5 AC116447.1-201ENST00000613153 453 ntBASIC6.59□□□□□ -1.35
RNF39Q9H2S5 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF39Q9H2S5 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RNF39Q9H2S5 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.59□□□□□ -1.36
RNF39Q9H2S5 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
RNF39Q9H2S5 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.59□□□□□ -1.36
RNF39Q9H2S5 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
RNF39Q9H2S5 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
RNF39Q9H2S5 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
RNF39Q9H2S5 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
RNF39Q9H2S5 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF39Q9H2S5 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF39Q9H2S5 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF39Q9H2S5 RNU1-150P-201ENST00000362491 162 ntBASIC6.58□□□□□ -1.36
RNF39Q9H2S5 RNU6-161P-201ENST00000363051 106 ntBASIC6.58□□□□□ -1.36
RNF39Q9H2S5 RNA5SP333-201ENST00000363466 118 ntBASIC6.58□□□□□ -1.36
RNF39Q9H2S5 Y_RNA.253-201ENST00000364562 112 ntBASIC6.58□□□□□ -1.36
RNF39Q9H2S5 RNA5SP334-201ENST00000364825 118 ntBASIC6.58□□□□□ -1.36
RNF39Q9H2S5 MIR1203-201ENST00000408812 85 ntBASIC6.58□□□□□ -1.36
RNF39Q9H2S5 RNU6-519P-201ENST00000410590 108 ntBASIC6.58□□□□□ -1.36
RNF39Q9H2S5 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF39Q9H2S5 RPL19P16-201ENST00000433839 588 ntBASIC6.58□□□□□ -1.36
RNF39Q9H2S5 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF39Q9H2S5 AL513043.2-201ENST00000573941 143 ntBASIC6.58□□□□□ -1.36
RNF39Q9H2S5 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF39Q9H2S5 AL591926.8-201ENST00000616876 211 ntBASIC6.58□□□□□ -1.36
RNF39Q9H2S5 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF39Q9H2S5 AP005431.1-201ENST00000618479 319 ntBASIC6.58□□□□□ -1.36
RNF39Q9H2S5 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF39Q9H2S5 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF39Q9H2S5 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF39Q9H2S5 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF39Q9H2S5 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF39Q9H2S5 OR13C1P-202ENST00000641378 2919 ntBASIC6.58□□□□□ -1.36
RNF39Q9H2S5 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF39Q9H2S5 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF39Q9H2S5 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
RNF39Q9H2S5 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 Y_RNA.236-201ENST00000364427 111 ntBASIC6.57□□□□□ -1.36
RNF39Q9H2S5 RNU2-50P-201ENST00000410494 143 ntBASIC6.57□□□□□ -1.36
RNF39Q9H2S5 TOMM22P1-201ENST00000418578 312 ntBASIC6.57□□□□□ -1.36
RNF39Q9H2S5 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 AC069257.2-201ENST00000441819 155 ntBASIC6.57□□□□□ -1.36
RNF39Q9H2S5 AC068522.1-201ENST00000482895 345 ntBASIC6.57□□□□□ -1.36
RNF39Q9H2S5 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.57□□□□□ -1.36
RNF39Q9H2S5 AC067852.5-201ENST00000589299 310 ntBASIC6.57□□□□□ -1.36
RNF39Q9H2S5 AC020916.2-201ENST00000591242 360 ntBASIC6.57□□□□□ -1.36
RNF39Q9H2S5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC6.57□□□□□ -1.36
RNF39Q9H2S5 TCL6_3.1-201ENST00000619064 137 ntBASIC6.57□□□□□ -1.36
RNF39Q9H2S5 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
RNF39Q9H2S5 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.56□□□□□ -1.36
RNF39Q9H2S5 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
RNF39Q9H2S5 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RNF39Q9H2S5 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.56□□□□□ -1.36
RNF39Q9H2S5 RNU1-22P-201ENST00000363334 158 ntBASIC6.56□□□□□ -1.36
RNF39Q9H2S5 SNORA25.4-201ENST00000363666 124 ntBASIC6.56□□□□□ -1.36
RNF39Q9H2S5 SNORD115-31-201ENST00000365318 82 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms