Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 DHX9P1-201ENST00000436565 3076 ntBASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 MAPK10-328ENST00000641553 4009 ntBASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 KCNMB3P1-202ENST00000493696 3389 ntBASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 RNU6-824P-201ENST00000363724 104 ntBASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 C22orf15-202ENST00000382821 646 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 MIR1204-201ENST00000408388 67 ntBASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 RNA5SP237-201ENST00000410414 113 ntBASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 AC027119.1-201ENST00000440877 241 ntBASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 AL606517.2-201ENST00000442855 241 ntBASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 CYCSP35-201ENST00000451978 304 ntBASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 RNA5SP460-201ENST00000516789 100 ntBASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 IGHV1OR15-3-201ENST00000564926 351 ntBASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 MIR5089-201ENST00000580047 84 ntBASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 AC087645.1-201ENST00000588528 291 ntBASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 SNORA62.6-201ENST00000606322 83 ntBASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 MIAT_exon1.1-201ENST00000617016 135 ntBASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRTAP3-3Q9BYR6 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
KRTAP3-3Q9BYR6 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
KRTAP3-3Q9BYR6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
KRTAP3-3Q9BYR6 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
KRTAP3-3Q9BYR6 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
KRTAP3-3Q9BYR6 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
KRTAP3-3Q9BYR6 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
KRTAP3-3Q9BYR6 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
KRTAP3-3Q9BYR6 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
KRTAP3-3Q9BYR6 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
KRTAP3-3Q9BYR6 AC034111.1-201ENST00000562143 3770 ntBASIC3.65□□□□□ -1.82
KRTAP3-3Q9BYR6 RNA5SP322-201ENST00000363617 119 ntBASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 RNU1-32P-201ENST00000363937 159 ntBASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 HMGN2P39-201ENST00000398005 273 ntBASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 MRPS21P5-201ENST00000417885 231 ntBASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 RN7SL65P-201ENST00000485221 315 ntBASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 RNU2-19P-201ENST00000517288 84 ntBASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 AL133304.3-201ENST00000550089 477 ntTSL 3 BASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 CYP3A52P-201ENST00000563326 91 ntBASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 AL109933.4-201ENST00000612111 157 ntBASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 AL162274.2-201ENST00000614406 332 ntBASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 uc_338.33-201ENST00000614988 170 ntBASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 AC245028.3-201ENST00000618197 285 ntBASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 STX3-208ENST00000641815 3236 ntBASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC3.65□□□□□ -1.83
KRTAP3-3Q9BYR6 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
KRTAP3-3Q9BYR6 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC3.64□□□□□ -1.83
KRTAP3-3Q9BYR6 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
KRTAP3-3Q9BYR6 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
KRTAP3-3Q9BYR6 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-3Q9BYR6 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
KRTAP3-3Q9BYR6 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRTAP3-3Q9BYR6 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms