Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 RN7SL52P-201ENST00000584271 284 ntBASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 AL031274.2-201ENST00000599419 203 ntBASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-91P-201ENST00000607774 107 ntBASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 MIR6798-201ENST00000612887 67 ntBASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 TUG1_2.1-201ENST00000614234 87 ntBASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 RN7SL722P-201ENST00000617780 284 ntBASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 RN7SL565P-201ENST00000618246 284 ntBASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 AL162726.3-218ENST00000636401 95 ntBASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 UBE3AP2-201ENST00000429033 2259 ntBASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-3Q9BYR4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 BCORP1-203ENST00000513194 5093 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 AP001029.2-203ENST00000589795 4910 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 AC092681.1-201ENST00000297369 291 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 Y_RNA.52-201ENST00000362760 96 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 Y_RNA.57-201ENST00000362806 113 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU1-74P-201ENST00000384108 171 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-524P-201ENST00000384270 107 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-424P-201ENST00000384367 105 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 U3.20-201ENST00000390909 217 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 RNA5SP332-201ENST00000391063 115 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU1-139P-201ENST00000391307 165 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 AC013442.1-201ENST00000397347 228 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 MIR1303-201ENST00000408625 86 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-887P-201ENST00000410660 100 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 RNA5SP111-201ENST00000411386 101 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 AC016397.1-201ENST00000412463 242 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 AL354868.1-201ENST00000417077 482 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 VDAC1P3-201ENST00000434069 851 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 AC108734.1-201ENST00000439549 399 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 AL450023.3-201ENST00000440592 271 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 RPL21P71-201ENST00000465598 459 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 RN7SL197P-201ENST00000466981 299 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 AC006463.2-201ENST00000473326 348 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 UBA52P3-201ENST00000491303 382 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 RN7SL244P-201ENST00000493405 297 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 AC108022.1-201ENST00000493466 478 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 RPL30P5-201ENST00000494923 336 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC1.69□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms