Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.76□□□□□ -2.29
VPS25Q9BRG1 SNORD116-28-201ENST00000516123 91 ntBASIC0.76□□□□□ -2.29
VPS25Q9BRG1 snoZ278.1-201ENST00000517059 112 ntBASIC0.76□□□□□ -2.29
VPS25Q9BRG1 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
VPS25Q9BRG1 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC0.76□□□□□ -2.29
VPS25Q9BRG1 AP006587.4-201ENST00000526053 529 ntBASIC0.76□□□□□ -2.29
VPS25Q9BRG1 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.76□□□□□ -2.29
VPS25Q9BRG1 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.76□□□□□ -2.29
VPS25Q9BRG1 BX323046.1-201ENST00000610145 535 ntBASIC0.76□□□□□ -2.29
VPS25Q9BRG1 AC010133.1-201ENST00000615809 842 ntBASIC0.76□□□□□ -2.29
VPS25Q9BRG1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.76□□□□□ -2.29
VPS25Q9BRG1 AC138627.2-201ENST00000624202 601 ntBASIC0.76□□□□□ -2.29
VPS25Q9BRG1 AC064859.1-201ENST00000624741 174 ntBASIC0.76□□□□□ -2.29
VPS25Q9BRG1 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
VPS25Q9BRG1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
VPS25Q9BRG1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
VPS25Q9BRG1 MIR506-201ENST00000384998 124 ntBASIC0.75□□□□□ -2.29
VPS25Q9BRG1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
VPS25Q9BRG1 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
VPS25Q9BRG1 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.75□□□□□ -2.29
VPS25Q9BRG1 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.75□□□□□ -2.29
VPS25Q9BRG1 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.75□□□□□ -2.29
VPS25Q9BRG1 HMGB1P31-201ENST00000437242 427 ntBASIC0.75□□□□□ -2.29
VPS25Q9BRG1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.75□□□□□ -2.29
VPS25Q9BRG1 BX322784.1-201ENST00000455793 1077 ntBASIC0.75□□□□□ -2.29
VPS25Q9BRG1 DUXAP8-207ENST00000456786 622 ntBASIC0.75□□□□□ -2.29
VPS25Q9BRG1 PRELID3BP1-201ENST00000457142 540 ntBASIC0.75□□□□□ -2.29
VPS25Q9BRG1 RNU1-123P-201ENST00000458950 160 ntBASIC0.75□□□□□ -2.29
VPS25Q9BRG1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC0.75□□□□□ -2.29
VPS25Q9BRG1 AC079140.2-201ENST00000506193 142 ntBASIC0.75□□□□□ -2.29
VPS25Q9BRG1 PTP4A1P4-201ENST00000512479 322 ntBASIC0.75□□□□□ -2.29
VPS25Q9BRG1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.75□□□□□ -2.29
VPS25Q9BRG1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.75□□□□□ -2.29
VPS25Q9BRG1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC0.75□□□□□ -2.29
VPS25Q9BRG1 LINC00557-201ENST00000563184 1279 ntBASIC0.75□□□□□ -2.29
VPS25Q9BRG1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.75□□□□□ -2.29
VPS25Q9BRG1 AL035411.2-201ENST00000604022 421 ntBASIC0.75□□□□□ -2.29
VPS25Q9BRG1 AL355598.1-201ENST00000604169 202 ntBASIC0.75□□□□□ -2.29
VPS25Q9BRG1 AL139344.1-201ENST00000605228 195 ntBASIC0.75□□□□□ -2.29
VPS25Q9BRG1 AC123912.5-201ENST00000605470 343 ntBASIC0.75□□□□□ -2.29
VPS25Q9BRG1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.75□□□□□ -2.29
VPS25Q9BRG1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC0.75□□□□□ -2.29
VPS25Q9BRG1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.75□□□□□ -2.29
VPS25Q9BRG1 AC026634.1-201ENST00000634369 198 ntBASIC0.75□□□□□ -2.29
VPS25Q9BRG1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.74□□□□□ -2.29
VPS25Q9BRG1 MFSD8-213ENST00000641134 1327 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 Y_RNA.245-201ENST00000364493 95 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 RNU1-36P-201ENST00000365130 165 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
VPS25Q9BRG1 DHFRP6-201ENST00000401776 268 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 MIR1267-201ENST00000408723 78 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 RNU6-174P-201ENST00000410406 106 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 RNU6-575P-201ENST00000411326 105 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 MTATP6P27-201ENST00000416987 621 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 POLR2J4-204ENST00000418424 324 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 NCOR1P3-201ENST00000420479 303 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 BX119904.4-201ENST00000424402 301 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC0.74□□□□□ -2.29
VPS25Q9BRG1 AC245047.4-201ENST00000433189 144 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 RPL23AP76-201ENST00000441860 458 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 OR6C5P-201ENST00000452388 923 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 AC114982.1-201ENST00000469402 321 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 AC010409.1-201ENST00000487382 476 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.74□□□□□ -2.29
VPS25Q9BRG1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC0.74□□□□□ -2.29
VPS25Q9BRG1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.74□□□□□ -2.29
VPS25Q9BRG1 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC0.74□□□□□ -2.29
VPS25Q9BRG1 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.74□□□□□ -2.29
VPS25Q9BRG1 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC0.74□□□□□ -2.29
VPS25Q9BRG1 AC136932.1-201ENST00000574771 208 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.74□□□□□ -2.29
VPS25Q9BRG1 WISP1-OT1-201ENST00000602893 642 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 AC087045.1-201ENST00000605856 382 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 AC004908.3-201ENST00000610248 625 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 MIR1264-201ENST00000616374 69 ntBASIC0.74□□□□□ -2.29
VPS25Q9BRG1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.74□□□□□ -2.29
VPS25Q9BRG1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.74□□□□□ -2.29
VPS25Q9BRG1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.74□□□□□ -2.29
VPS25Q9BRG1 SNORD33-201ENST00000362761 85 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 RNU6-60P-201ENST00000364792 103 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 Y_RNA.333-201ENST00000365274 102 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 SNORA3.2-201ENST00000408221 125 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 Z92545.1-201ENST00000411782 234 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.73□□□□□ -2.29
VPS25Q9BRG1 AL121882.1-201ENST00000422893 417 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC0.73□□□□□ -2.29
VPS25Q9BRG1 UBE2V2P3-201ENST00000433562 437 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 RPS15AP9-201ENST00000439856 381 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC0.73□□□□□ -2.29
VPS25Q9BRG1 RNU7-140P-201ENST00000459546 60 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 AC087477.1-201ENST00000465747 340 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.73□□□□□ -2.29
VPS25Q9BRG1 AC108729.1-201ENST00000487812 947 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 MTCYBP18-201ENST00000501056 747 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 TMEM251P1-201ENST00000503717 318 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.73□□□□□ -2.29
VPS25Q9BRG1 AC010460.2-201ENST00000509054 677 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 AC027309.2-201ENST00000520566 192 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms