Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 Y_RNA.176-201ENST00000363815 109 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.12□□□□□ -1.91
NOTCH4Q99466 RNU6-1032P-201ENST00000384100 107 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 SSXP10-201ENST00000402595 565 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 U3.42-201ENST00000408746 214 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 AC009302.1-201ENST00000417147 390 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 RPL12P46-201ENST00000436610 195 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 MTCO3P45-201ENST00000443036 613 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 RPL7P52-201ENST00000449200 742 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.12□□□□□ -1.91
NOTCH4Q99466 AC010401.1-201ENST00000463867 348 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 AC079140.5-201ENST00000507882 310 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 RNU6-189P-201ENST00000516120 101 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 SCARNA24.1-201ENST00000516465 137 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.12□□□□□ -1.91
NOTCH4Q99466 AC009902.1-201ENST00000519351 183 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.12□□□□□ -1.91
NOTCH4Q99466 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NOTCH4Q99466 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.12□□□□□ -1.91
NOTCH4Q99466 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.12□□□□□ -1.91
NOTCH4Q99466 UBE2L4-201ENST00000587688 464 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.12□□□□□ -1.91
NOTCH4Q99466 BNIP3P25-201ENST00000596023 559 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 AC068790.3-201ENST00000602988 553 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 AC007938.3-201ENST00000604965 623 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 AC011155.2-201ENST00000623202 216 ntBASIC3.12□□□□□ -1.91
NOTCH4Q99466 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NOTCH4Q99466 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NOTCH4Q99466 KPNA2P1-201ENST00000458289 1591 ntBASIC3.11□□□□□ -1.91
NOTCH4Q99466 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
NOTCH4Q99466 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NOTCH4Q99466 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NOTCH4Q99466 AC011978.2-201ENST00000569835 2054 ntBASIC3.11□□□□□ -1.91
NOTCH4Q99466 SNORD3E-201ENST00000362899 217 ntBASIC3.11□□□□□ -1.91
NOTCH4Q99466 RNU6-1078P-201ENST00000364522 103 ntBASIC3.11□□□□□ -1.91
NOTCH4Q99466 U3.20-201ENST00000390909 217 ntBASIC3.11□□□□□ -1.91
NOTCH4Q99466 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NOTCH4Q99466 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.11□□□□□ -1.91
NOTCH4Q99466 AL591212.2-201ENST00000433923 257 ntBASIC3.11□□□□□ -1.91
NOTCH4Q99466 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.11□□□□□ -1.91
NOTCH4Q99466 FTH1P1-201ENST00000437933 532 ntBASIC3.11□□□□□ -1.91
NOTCH4Q99466 RNU7-182P-201ENST00000459009 62 ntBASIC3.11□□□□□ -1.91
NOTCH4Q99466 RNA5SP337-201ENST00000517007 109 ntBASIC3.11□□□□□ -1.91
NOTCH4Q99466 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.11□□□□□ -1.91
NOTCH4Q99466 AP005435.4-201ENST00000529514 284 ntBASIC3.11□□□□□ -1.91
NOTCH4Q99466 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.11□□□□□ -1.91
NOTCH4Q99466 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.11□□□□□ -1.91
NOTCH4Q99466 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.11□□□□□ -1.91
NOTCH4Q99466 AC008269.2-201ENST00000561915 1105 ntBASIC3.11□□□□□ -1.91
NOTCH4Q99466 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.11□□□□□ -1.91
NOTCH4Q99466 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NOTCH4Q99466 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.11□□□□□ -1.91
NOTCH4Q99466 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
NOTCH4Q99466 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.11□□□□□ -1.91
NOTCH4Q99466 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.11□□□□□ -1.91
NOTCH4Q99466 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.11□□□□□ -1.91
NOTCH4Q99466 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
NOTCH4Q99466 AC233263.6-201ENST00000631132 1963 ntBASIC3.11□□□□□ -1.91
NOTCH4Q99466 AL139811.1-201ENST00000424779 2299 ntBASIC3.11□□□□□ -1.91
NOTCH4Q99466 Y_RNA.252-201ENST00000364556 101 ntBASIC3.1□□□□□ -1.91
NOTCH4Q99466 DEFB109C-201ENST00000382575 264 ntBASIC3.1□□□□□ -1.91
NOTCH4Q99466 DEFB109B-201ENST00000382656 264 ntBASIC3.1□□□□□ -1.91
NOTCH4Q99466 RNU6-1040P-201ENST00000383974 107 ntBASIC3.1□□□□□ -1.91
NOTCH4Q99466 RNU6-641P-201ENST00000384006 107 ntBASIC3.1□□□□□ -1.91
NOTCH4Q99466 Y_RNA.489-201ENST00000384410 101 ntBASIC3.1□□□□□ -1.91
NOTCH4Q99466 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH4Q99466 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH4Q99466 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.1□□□□□ -1.91
NOTCH4Q99466 RPL7P28-201ENST00000437739 740 ntBASIC3.1□□□□□ -1.91
NOTCH4Q99466 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.1□□□□□ -1.91
NOTCH4Q99466 AC020550.1-201ENST00000447385 163 ntBASIC3.1□□□□□ -1.91
NOTCH4Q99466 RN7SL432P-201ENST00000484057 298 ntBASIC3.1□□□□□ -1.91
NOTCH4Q99466 AC104564.1-201ENST00000493028 407 ntBASIC3.1□□□□□ -1.91
NOTCH4Q99466 RPL22P13-201ENST00000493291 347 ntBASIC3.1□□□□□ -1.91
NOTCH4Q99466 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.1□□□□□ -1.91
NOTCH4Q99466 AC109329.2-201ENST00000519658 482 ntBASIC3.1□□□□□ -1.91
NOTCH4Q99466 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH4Q99466 MIR4425-201ENST00000580572 84 ntBASIC3.1□□□□□ -1.91
NOTCH4Q99466 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.1□□□□□ -1.91
NOTCH4Q99466 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.1□□□□□ -1.91
NOTCH4Q99466 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.1□□□□□ -1.91
NOTCH4Q99466 Z82243.1-201ENST00000609432 473 ntBASIC3.1□□□□□ -1.91
NOTCH4Q99466 AC107294.1-201ENST00000609524 467 ntBASIC3.1□□□□□ -1.91
NOTCH4Q99466 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH4Q99466 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH4Q99466 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
NOTCH4Q99466 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.1□□□□□ -1.91
NOTCH4Q99466 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH4Q99466 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.1□□□□□ -1.91
NOTCH4Q99466 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH4Q99466 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH4Q99466 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.1□□□□□ -1.91
NOTCH4Q99466 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH4Q99466 SNORA62.1-201ENST00000364287 154 ntBASIC3.1□□□□□ -1.91
NOTCH4Q99466 Y_RNA.373-201ENST00000365600 103 ntBASIC3.1□□□□□ -1.91
NOTCH4Q99466 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH4Q99466 RNU6-38P-201ENST00000384085 107 ntBASIC3.1□□□□□ -1.91
NOTCH4Q99466 RNU6-278P-201ENST00000390945 109 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms