Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRCH3Q96II8 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
LRCH3Q96II8 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LRCH3Q96II8 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.45□□□□□ -1.54
LRCH3Q96II8 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LRCH3Q96II8 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LRCH3Q96II8 ELOCP21-201ENST00000412558 336 ntBASIC5.45□□□□□ -1.54
LRCH3Q96II8 RNF10P1-201ENST00000418589 369 ntBASIC5.45□□□□□ -1.54
LRCH3Q96II8 AC112220.1-201ENST00000434628 355 ntBASIC5.45□□□□□ -1.54
LRCH3Q96II8 RPL12P18-201ENST00000437175 325 ntBASIC5.45□□□□□ -1.54
LRCH3Q96II8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC5.45□□□□□ -1.54
LRCH3Q96II8 AL031737.1-201ENST00000450125 223 ntBASIC5.45□□□□□ -1.54
LRCH3Q96II8 CYCSP23-201ENST00000519781 313 ntBASIC5.45□□□□□ -1.54
LRCH3Q96II8 AL161756.2-201ENST00000604597 246 ntBASIC5.45□□□□□ -1.54
LRCH3Q96II8 ARF4P1-201ENST00000605447 541 ntBASIC5.45□□□□□ -1.54
LRCH3Q96II8 AL445567.2-201ENST00000618935 498 ntBASIC5.45□□□□□ -1.54
LRCH3Q96II8 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
LRCH3Q96II8 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LRCH3Q96II8 MAPK10-328ENST00000641553 4009 ntBASIC5.45□□□□□ -1.54
LRCH3Q96II8 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.45□□□□□ -1.54
LRCH3Q96II8 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRCH3Q96II8 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
LRCH3Q96II8 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRCH3Q96II8 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRCH3Q96II8 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.45□□□□□ -1.54
LRCH3Q96II8 AL672167.1-205ENST00000641112 3080 ntBASIC5.44□□□□□ -1.54
LRCH3Q96II8 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
LRCH3Q96II8 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.44□□□□□ -1.54
LRCH3Q96II8 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
LRCH3Q96II8 RNU1-94P-201ENST00000362627 173 ntBASIC5.44□□□□□ -1.54
LRCH3Q96II8 SNORD113.2-201ENST00000364166 89 ntBASIC5.44□□□□□ -1.54
LRCH3Q96II8 U8.6-201ENST00000364939 135 ntBASIC5.44□□□□□ -1.54
LRCH3Q96II8 Y_RNA.393-201ENST00000383936 102 ntBASIC5.44□□□□□ -1.54
LRCH3Q96II8 Y_RNA.521-201ENST00000384560 114 ntBASIC5.44□□□□□ -1.54
LRCH3Q96II8 Y_RNA.630-201ENST00000411370 108 ntBASIC5.44□□□□□ -1.54
LRCH3Q96II8 Z85995.1-201ENST00000415547 335 ntBASIC5.44□□□□□ -1.54
LRCH3Q96II8 RPL23AP95-201ENST00000426806 265 ntBASIC5.44□□□□□ -1.54
LRCH3Q96II8 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.44□□□□□ -1.54
LRCH3Q96II8 AL714022.1-201ENST00000439897 151 ntBASIC5.44□□□□□ -1.54
LRCH3Q96II8 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.44□□□□□ -1.54
LRCH3Q96II8 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC5.44□□□□□ -1.54
LRCH3Q96II8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC5.44□□□□□ -1.54
LRCH3Q96II8 RNU6-638P-201ENST00000516582 104 ntBASIC5.44□□□□□ -1.54
LRCH3Q96II8 RNA5SP290-201ENST00000517133 127 ntBASIC5.44□□□□□ -1.54
LRCH3Q96II8 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.44□□□□□ -1.54
LRCH3Q96II8 AC136628.3-201ENST00000521868 290 ntBASIC5.44□□□□□ -1.54
LRCH3Q96II8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.44□□□□□ -1.54
LRCH3Q96II8 Y_RNA.757-201ENST00000578934 114 ntBASIC5.44□□□□□ -1.54
LRCH3Q96II8 AL391903.3-201ENST00000612158 163 ntBASIC5.44□□□□□ -1.54
LRCH3Q96II8 AL391261.4-201ENST00000616012 481 ntBASIC5.44□□□□□ -1.54
LRCH3Q96II8 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
LRCH3Q96II8 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.44□□□□□ -1.54
LRCH3Q96II8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.44□□□□□ -1.54
LRCH3Q96II8 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LRCH3Q96II8 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LRCH3Q96II8 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.44□□□□□ -1.54
LRCH3Q96II8 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRCH3Q96II8 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.44□□□□□ -1.54
LRCH3Q96II8 AP001642.1-201ENST00000624727 2117 ntBASIC5.44□□□□□ -1.54
LRCH3Q96II8 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
LRCH3Q96II8 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
LRCH3Q96II8 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LRCH3Q96II8 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.44□□□□□ -1.54
LRCH3Q96II8 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRCH3Q96II8 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRCH3Q96II8 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
LRCH3Q96II8 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.43□□□□□ -1.54
LRCH3Q96II8 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
LRCH3Q96II8 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.43□□□□□ -1.54
LRCH3Q96II8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRCH3Q96II8 OR4F13P-202ENST00000560066 2054 ntBASIC5.43□□□□□ -1.54
LRCH3Q96II8 AC005005.4-201ENST00000623789 16698 ntBASIC5.43□□□□□ -1.54
LRCH3Q96II8 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRCH3Q96II8 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.43□□□□□ -1.54
LRCH3Q96II8 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRCH3Q96II8 RNU6-969P-201ENST00000383900 105 ntBASIC5.43□□□□□ -1.54
LRCH3Q96II8 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.43□□□□□ -1.54
LRCH3Q96II8 LINC02210-201ENST00000444561 288 ntBASIC5.43□□□□□ -1.54
LRCH3Q96II8 RPS27P1-201ENST00000450552 247 ntBASIC5.43□□□□□ -1.54
LRCH3Q96II8 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC5.43□□□□□ -1.54
LRCH3Q96II8 RPS20P22-201ENST00000473700 357 ntBASIC5.43□□□□□ -1.54
LRCH3Q96II8 RNU6-436P-201ENST00000516171 114 ntBASIC5.43□□□□□ -1.54
LRCH3Q96II8 RNU6-561P-201ENST00000516222 102 ntBASIC5.43□□□□□ -1.54
LRCH3Q96II8 SNORA31.9-201ENST00000516429 84 ntBASIC5.43□□□□□ -1.54
LRCH3Q96II8 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.43□□□□□ -1.54
LRCH3Q96II8 MIR5571-201ENST00000577998 113 ntBASIC5.43□□□□□ -1.54
LRCH3Q96II8 RNA5SP196-201ENST00000625967 102 ntBASIC5.43□□□□□ -1.54
LRCH3Q96II8 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.43□□□□□ -1.54
LRCH3Q96II8 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRCH3Q96II8 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.43□□□□□ -1.54
LRCH3Q96II8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRCH3Q96II8 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRCH3Q96II8 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.43□□□□□ -1.54
LRCH3Q96II8 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
LRCH3Q96II8 AL138820.1-201ENST00000617901 5305 ntBASIC5.43□□□□□ -1.54
LRCH3Q96II8 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRCH3Q96II8 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRCH3Q96II8 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LRCH3Q96II8 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.42□□□□□ -1.54
LRCH3Q96II8 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms