Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MTND1P19-201ENST00000511780 315 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 RNA5SP519-201ENST00000516480 119 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 RNA5SP73-201ENST00000516744 108 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 CYCSP39-201ENST00000565821 309 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 AC012468.1-201ENST00000604888 430 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 AC008962.1-201ENST00000605729 304 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 MIR3976-201ENST00000606807 139 ntBASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
NPAS4Q8IUM7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 Y_RNA.60-201ENST00000362831 98 ntBASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 RNA5SP513-201ENST00000364648 118 ntBASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 Y_RNA.477-201ENST00000384352 108 ntBASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 EIF4EP2-201ENST00000422816 654 ntBASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 CHEK2P4-201ENST00000450340 246 ntBASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 RPL17P19-201ENST00000489069 552 ntBASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 UBE2CP3-201ENST00000502715 450 ntBASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 AC099522.1-202ENST00000514718 367 ntBASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 IGHV3-76-201ENST00000522465 295 ntBASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 HIGD1AP1-201ENST00000550979 275 ntBASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 AC005476.1-201ENST00000554427 397 ntBASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 MIR4286-201ENST00000580651 93 ntBASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 MTND4LP5-201ENST00000605152 292 ntBASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 HMGB1P50-201ENST00000605814 607 ntBASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 AC012603.1-201ENST00000606424 528 ntBASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 AC091905.2-201ENST00000623143 306 ntBASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.68□□□□□ -1.66
NPAS4Q8IUM7 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 AC018529.3-201ENST00000624212 2254 ntBASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 Y_RNA.314-201ENST00000365114 102 ntBASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 SNORD14.1-201ENST00000365609 90 ntBASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 Y_RNA.483-201ENST00000384380 101 ntBASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 RNU2-38P-201ENST00000410856 79 ntBASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 RNU6-1245P-201ENST00000411130 106 ntBASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 RPL23AP25-201ENST00000430973 463 ntBASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 RPL35AP15-201ENST00000468042 339 ntBASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 RNU6-612P-201ENST00000516909 102 ntBASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 Y_RNA.715-201ENST00000517082 110 ntBASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 SUB1P3-201ENST00000564581 315 ntBASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 SRGNP1-201ENST00000603392 451 ntBASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 Z98751.3-201ENST00000604447 521 ntBASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 AL138825.1-201ENST00000618587 192 ntBASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 AC137590.2-201ENST00000619709 240 ntBASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.67□□□□□ -1.66
NPAS4Q8IUM7 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 AF127577.6-201ENST00000623352 2191 ntBASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 Y_RNA.26-201ENST00000362539 101 ntBASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 RNU6-527P-201ENST00000363425 104 ntBASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 RNA5SP130-201ENST00000364431 114 ntBASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 MIR921-201ENST00000401133 56 ntBASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 MIR1302-6-201ENST00000408466 90 ntBASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 RN7SKP202-201ENST00000410439 330 ntBASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 AC108032.1-201ENST00000416706 207 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms