Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 RPL12P39-201ENST00000455456 496 ntBASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 AL138963.2-201ENST00000605137 226 ntBASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PRPF38BQ5VTL8 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 RNU6-961P-201ENST00000363893 105 ntBASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 Y_RNA.230-201ENST00000364348 109 ntBASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 RNU1-140P-201ENST00000365040 165 ntBASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 RNA5SP22-201ENST00000365393 109 ntBASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 RNA5SP366-201ENST00000365454 123 ntBASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 RNU6-281P-201ENST00000384212 103 ntBASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 SNORD116-20-201ENST00000384529 92 ntBASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 TBCAP2-201ENST00000416175 326 ntBASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 BX276092.6-201ENST00000430476 250 ntBASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 BX323845.1-201ENST00000432417 179 ntBASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 RPL23AP3-201ENST00000453844 468 ntBASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 BX276092.8-201ENST00000455722 250 ntBASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 RNU6-1219P-201ENST00000516143 112 ntBASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 AC122688.1-201ENST00000541494 223 ntBASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 AC005828.6-201ENST00000606610 232 ntBASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 AP005432.2-201ENST00000608162 586 ntBASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 AC019176.2-201ENST00000611579 315 ntBASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 AC012442.3-202ENST00000636742 206 ntBASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF38BQ5VTL8 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 RNU1-136P-201ENST00000384181 164 ntBASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 MTHFD2P2-201ENST00000407725 247 ntBASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 RNU6-1135P-201ENST00000411083 103 ntBASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 BMS1P22-201ENST00000414726 313 ntBASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 AP005660.1-201ENST00000522972 293 ntBASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 KLKP1-201ENST00000595979 403 ntBASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 AC005176.2-201ENST00000596933 147 ntBASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 AC068831.7-201ENST00000616954 363 ntBASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF38BQ5VTL8 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 SNORD56.1-201ENST00000362913 68 ntBASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 SNORD56.6-201ENST00000384569 71 ntBASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 Y_RNA.597-201ENST00000410463 100 ntBASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 SNORD108-201ENST00000459332 71 ntBASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 PARP4P3-201ENST00000510265 317 ntBASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 SNORA40.9-201ENST00000515895 93 ntBASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 RNU1-103P-201ENST00000516502 125 ntBASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 RNU6-1198P-201ENST00000516904 67 ntBASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 AL391261.3-201ENST00000557194 520 ntBASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 RNA5SP439-201ENST00000617595 124 ntBASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 AL360270.2-201ENST00000562952 5985 ntBASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PRPF38BQ5VTL8 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF38BQ5VTL8 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF38BQ5VTL8 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF38BQ5VTL8 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF38BQ5VTL8 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRPF38BQ5VTL8 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms